RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TSNAXIP1Q2TAA8 658 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 CYP27C1Q4G0S4 372 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 HEPHL1Q6MZM0 1159 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 GALNT18Q6P9A2 607 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 OR6K3Q8NGY3 331 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 GFM2Q969S9 779 aaKnown RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 EXOSC8Q96B26 276 aaKnown RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 MRPL57Q9BQC6 102 aaKnown RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 ACPTQ9BZG2 426 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 SHCBP1LQ9BZQ2 653 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 CXorf56Q9H5V9 222 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 PFDN4Q9NQP4 134 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 SLC35C2Q9NQQ7 365 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 ZDHHC18Q9NUE0 388 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 FAM120CQ9NX05 1096 aaKnown RBP10.9□□□□□ -0.66
LIMS2-210ENST00000413578 SIRT5Q9NXA8 310 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 TAS2R9Q9NYW1 312 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 AP4B1Q9Y6B7 739 aa10.9□□□□□ -0.66
LIMS2-210ENST00000413578 MYO1GB0I1T2 1018 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 H3BML4 177 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 PCDH7O60245 1069 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 ESRRBO95718 433 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 COL6A2P12110 1019 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 HSD17B3P37058 310 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 RPS3AP61247 264 aaKnown RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF844Q08AG5 666 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 UAP1Q16222 522 aaPredicted RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 EXOC3L2Q2M3D2 409 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 CTU2Q2VPK5 515 aaKnown RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 ADAM5Q6NVV9 412 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 APOOLQ6UXV4 268 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 MARCH3Q86UD3 253 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 FAM9CQ8IZT9 166 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 LILRB1Q8NHL6 650 aaPredicted RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 C16orf78Q8WTQ4 265 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 APIPQ96GX9 242 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 GMPPAQ96IJ6 420 aaPredicted RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 RAB17Q9H0T7 212 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 OR10A4Q9H209 315 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 MRPL46Q9H2W6 279 aaKnown RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 PTGES2Q9H7Z7 377 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 SDHAF3Q9NRP4 125 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 NINJ2Q9NZG7 142 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 C19orf53Q9UNZ5 99 aaPredicted RBP10.89□□□□□ -0.67
LIMS2-210ENST00000413578 OR10H1Q9Y4A9 318 aa10.89□□□□□ -0.67
LIMS2-210ENST00000413578 COQ9O75208 318 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 SLITRK5O94991 958 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 IL33O95760 270 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 DANCRP0C864 163 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF17P17021 662 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 PSMB1P20618 241 aaKnown RBP10.88□□□□□ -0.67
LIMS2-210ENST00000413578 TIA1P31483 386 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIMS2-210ENST00000413578 MPIP34949 423 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 HTR6P50406 440 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 CLCQ05315 142 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 DMTNQ08495 405 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF155Q12901 538 aaPredicted RBP10.88□□□□□ -0.67
LIMS2-210ENST00000413578 STX5Q13190 355 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 HEPACAMQ14CZ8 416 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 SPIN4Q56A73 249 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 PRR14LQ5THK1 2151 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 DNM1P46Q6ZS02 220 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 RELL1Q8IUW5 271 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 OR2L13Q8N349 312 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 CDYL2Q8N8U2 506 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIMS2-210ENST00000413578 DUSP19Q8WTR2 217 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 PLPPR2Q96GM1 343 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF382Q96SR6 550 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 LMF2Q9BU23 707 aaKnown RBP10.88□□□□□ -0.67
LIMS2-210ENST00000413578 ACTR6Q9GZN1 396 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 GIMAP4Q9NUV9 329 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 TAS2R7Q9NYW3 318 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 CLEC4AQ9UMR7 237 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 EMC9Q9Y3B6 208 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 ABCA1O95477 2261 aa10.88□□□□□ -0.67
LIMS2-210ENST00000413578 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 SHISA8B8ZZ34 492 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 UPK1AO00322 258 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 ADAMDEC1O15204 470 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 IGKV1D-16P01601 117 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 KRT6AP02538 564 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 KRT6BP04259 564 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 SOD3P08294 240 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 DDCP20711 480 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 PSMA4P25789 261 aaKnown RBP10.87□□□□□ -0.67
LIMS2-210ENST00000413578 GSTM5P46439 218 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 KRT6CP48668 564 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 RPS4XP62701 263 aaKnown RBP10.87□□□□□ -0.67
LIMS2-210ENST00000413578 PRR5P85299 388 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 RASA2Q15283 850 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 DECR1Q16698 335 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 UNC50Q53HI1 259 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 SH2D4BQ5SQS7 431 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF572Q7Z3I7 529 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-210ENST00000413578 WFDC8Q8IUA0 241 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 PHC2Q8IXK0 858 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 GTPBP8Q8N3Z3 284 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms