RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HSMCR30P0CW71 290 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 RNH1P13489 461 aaKnown RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 NID1P14543 1247 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 GABRA3P34903 492 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 OPRL1P41146 370 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 CLK1P49759 484 aaKnown RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 SKP1P63208 163 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 POU6F2P78424 691 aaPredicted RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 MED22Q15528 200 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 DEFB133Q30KQ1 61 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 SLC25A30Q5SVS4 291 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 MRPL2Q5T653 305 aaKnown RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 COL13A1Q5TAT6 717 aaPredicted RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 RASSF6Q6ZTQ3 369 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 C17orf82Q86X59 251 aaPredicted RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 CACTIN-AS1Q8N1I8 211 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 OR8D4Q8NGM9 314 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 TMEM255BQ8WV15 326 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 HLA-CQ95604 372 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 ZHX1-C8orf76Q96EF9 292 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 TBC1D23Q9NUY8 699 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 SLC7A7Q9UM01 511 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 COQ9O75208 318 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 GRK5P34947 590 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 RGS6P49758 472 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 C21orf59P57076 290 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 EFNB1P98172 346 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 MAP4K2Q12851 820 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 SLC13A2Q13183 592 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 RANBP3LQ86VV4 465 aaPredicted RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 HOXB13Q92826 284 aaPredicted RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 FGF11Q92914 225 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 HSPBAP1Q96EW2 488 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 PEX11GQ96HA9 241 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 TMEM80Q96HE8 168 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 ZBTB20Q9HC78 741 aaPredicted RBP22.82■■□□□ 1.24
VRK2-202ENST00000412104 FBXL21Q9UKT6 434 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 PMF1-BGLAPU3KQ54 211 aa22.82■■□□□ 1.24
VRK2-202ENST00000412104 TGFBR3LH3BV60 316 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 RPLP0P05388 317 aaKnown RBP22.81■■□□□ 1.24
VRK2-202ENST00000412104 IL9P15248 144 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 MLLT3P42568 568 aaPredicted RBP22.81■■□□□ 1.24
VRK2-202ENST00000412104 GABRA4P48169 554 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 SERPINB10P48595 397 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 PPM1FP49593 454 aaPredicted RBP22.81■■□□□ 1.24
VRK2-202ENST00000412104 GFERP55789 205 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 SYT14P1Q58G82 188 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 SLC27A4Q6P1M0 643 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 MBOAT2Q6ZWT7 520 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 ADCK1Q86TW2 530 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 GALNT12Q8IXK2 581 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 NRMQ8IXM6 262 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 VMP1Q96GC9 406 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 LRR1Q96L50 414 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 ARMC7Q9H6L4 198 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 CORINQ9Y5Q5 1042 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 CEP192Q8TEP8 1941 aa22.81■■□□□ 1.24
VRK2-202ENST00000412104 J3QRK9 145 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 PIP5K1CO60331 668 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 BRINP1O60477 761 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 NKX2-2O95096 273 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 PRG2P13727 222 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 FPR3P25089 353 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 CSTF2P33240 577 aaKnown RBP eCLIP22.8■■□□□ 1.24
VRK2-202ENST00000412104 NXPH1P58417 271 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 MAT1AQ00266 395 aaKnown RBP22.8■■□□□ 1.24
VRK2-202ENST00000412104 DOC2BQ14184 412 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 NCF4Q15080 339 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 SNAPC1Q16533 368 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 ARHGAP22Q7Z5H3 698 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 MRGPREQ86SM8 312 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 TOR1AIP2Q8NFQ8 470 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 SH3YL1Q96HL8 342 aaPredicted RBP22.8■■□□□ 1.24
VRK2-202ENST00000412104 ZNF285Q96NJ3 590 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 TGM7Q96PF1 710 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 MGLLQ99685 303 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 DCSTAMPQ9H295 470 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 CAPN10Q9HC96 672 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 OSGIN1Q9UJX0 560 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 CDHR4A6H8M9 788 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 KLF4O43474 513 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 SDC3O75056 442 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 CDC123O75794 336 aaPredicted RBP22.8■■□□□ 1.24
VRK2-202ENST00000412104 GKN3PP0CG01 181 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 S1PR1P21453 382 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 HTR2AP28223 471 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 GPR4P46093 362 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 RNF144AP50876 292 aaPredicted RBP22.8■■□□□ 1.24
VRK2-202ENST00000412104 HNRNPKP61978 463 aaKnown RBP eCLIP22.8■■□□□ 1.24
VRK2-202ENST00000412104 C11orf91Q3C1V1 193 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 PLEKHA8Q96JA3 519 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 ZNF582Q96NG8 517 aaPredicted RBP22.8■■□□□ 1.24
VRK2-202ENST00000412104 WNT16Q9UBV4 365 aa22.8■■□□□ 1.24
VRK2-202ENST00000412104 MRPS33Q9Y291 106 aaKnown RBP22.8■■□□□ 1.24
VRK2-202ENST00000412104 LMO7DNF2Z398 122 aa22.79■■□□□ 1.24
VRK2-202ENST00000412104 HRO43593 1189 aa22.79■■□□□ 1.24
VRK2-202ENST00000412104 NSA2O95478 260 aaKnown RBP22.79■■□□□ 1.24
VRK2-202ENST00000412104 STX4Q12846 297 aa22.79■■□□□ 1.24
VRK2-202ENST00000412104 FAM53BQ14153 422 aa22.79■■□□□ 1.24
VRK2-202ENST00000412104 LINC00299Q6ZSB3 139 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms