RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FAM189A1O60320 539 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR10H3O60404 316 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 HCN1O60741 890 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 SIX3O95343 332 aaPredicted RBP0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ANP32DO95626 131 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 SLC25A27O95847 323 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 GH1P01241 217 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 STSP08842 583 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 CD34P28906 385 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 KRT20P35900 424 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 SGSHP51688 502 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ACTA1P68133 377 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 CALD1Q05682 793 aaKnown RBP0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 RAB35Q15286 201 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 SHROOM1Q2M3G4 852 aaPredicted RBP0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ZNF699Q32M78 642 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 KRTAP13-4Q3LI77 160 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ABCA11PQ4W5N1 156 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 EOGTQ5NDL2 527 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 PRR9Q5T870 116 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 DDI2Q5TDH0 399 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 MEDAGQ5VYS4 303 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR5M10Q6IEU7 315 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ASRGL1Q7L266 308 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 HMGN2P46Q86SG4 172 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 CERS3Q8IU89 383 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 CCDC83Q8IWF9 413 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 STHQ8IWL8 128 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 TTC5Q8N0Z6 440 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 TMEM252Q8N6L7 170 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 DUSP18Q8NEJ0 188 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR2AP1Q8NGE2 309 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 OR52I1Q8NGK6 324 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ZCCHC13Q8WW36 166 aaKnown RBP0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 MR1Q95460 341 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 AP2M1Q96CW1 435 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 DEFB118Q96PH6 123 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 SMIM14Q96QK8 99 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ARHGDIGQ99819 225 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 CHMP4AQ9BY43 222 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 NMNAT2Q9BZQ4 307 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 GANQ9H2C0 597 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 TPK1Q9H3S4 243 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 FAM114A2Q9NRY5 505 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ABCB8Q9NUT2 735 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 ANAPC5Q9UJX4 755 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 PRPF19Q9UMS4 504 aaKnown RBP0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 KCNK6Q9Y257 313 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 HELZ2Q9BYK8 2649 aaKnown RBP0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 RAD54L2Q9Y4B4 1467 aa0.52□□□□□ -2.33
RNU2-55P-201ENST00000411146 IGHV1OR15-1A0A075B7D0 117 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 TRBV7-9A0A0J9YWB2 115 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 NKX2-6A6NCS4 301 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 TTI1O43156 1089 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 SH3BP5O60239 455 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 RAD51DO75771 328 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 RBBP9O75884 186 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 TNFSF13O75888 250 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 H2AFZP0C0S5 128 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 TSPY3P0CV98 308 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 TSPY8P0CW00 308 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 CPA3P15088 417 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 HOXA9P31269 272 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 HPDP32754 393 aaPredicted RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 RFC2P35250 354 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 SOAT1P35610 550 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 LONP1P36776 959 aaKnown RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 GP5P40197 560 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 FRKP42685 505 aaPredicted RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 NSFP46459 744 aaKnown RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 RPL29P47914 159 aaKnown RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 SMSP52788 366 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 GEMP55040 296 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 PRPS1P60891 318 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 ZNF154Q13106 437 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 NFE2L1Q14494 772 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 ATXN7L3Q14CW9 347 aaPredicted RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 CYP51A1Q16850 503 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 ZNF674Q2M3X9 581 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 CCDC57Q2TAC2 916 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 DCST2Q5T1A1 773 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 LRRC38Q5VT99 294 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 UNC5DQ6UXZ4 953 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 HACD2Q6Y1H2 254 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 SLC22A16Q86VW1 577 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 CYB561D1Q8N8Q1 229 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 LINC00304Q8N9R0 145 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 ANKRD49Q8WVL7 239 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 FAM151AQ8WW52 585 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 STARD8Q92502 1023 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 FGGYQ96C11 551 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 RPGRIP1Q96KN7 1286 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 FOPNLQ96NB1 174 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 DDX50Q9BQ39 737 aaKnown RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 HDHD3Q9BSH5 251 aaPredicted RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 MLPHQ9BV36 600 aaPredicted RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 CHIAQ9BZP6 476 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 MAF1Q9H063 256 aa0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 KAT8Q9H7Z6 458 aaKnown RBP0.51□□□□□ -2.33
RNU2-55P-201ENST00000411146 CAB39LQ9H9S4 337 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms