RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ZDHHC14Q8IZN3 488 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 GTF2H4Q92759 462 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 TEPSINQ96N21 525 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 SERINC2Q96SA4 455 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 SMOQ99835 787 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 C12orf49Q9H741 205 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 TMEM9Q9P0T7 183 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 BOKQ9UMX3 212 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 MGAT4BQ9UQ53 548 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 MEIS3P1A6NDR6 274 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 SNAPC5O75971 98 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 HNRNPA2B1P22626 353 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 P2RY2P41231 377 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 RPS26P11Q5JNZ5 115 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 TCTE1Q5JU00 501 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 MPP7Q5T2T1 576 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 EMC10Q5UCC4 262 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 APCDD1Q8J025 514 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 BANPQ8N9N5 519 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 STT3BQ8TCJ2 826 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 NR4A3Q92570 626 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF775Q96BV0 537 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 PFDN5Q99471 154 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 TESQ9UGI8 421 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 POMPQ9Y244 141 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 RTTNQ86VV8 2226 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 PLIN4Q96Q06 1357 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 ABCC6O95255 1503 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 MYADML2A6NDP7 307 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 A8MXE2 369 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC22A6Q4U2R8 563 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 OR5AK2Q8NH90 309 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF845Q96IR2 970 aaPredicted RBP10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC29A3Q9BZD2 475 aa10.65□□□□□ -0.71
PRPF40A-202ENST00000410080 IMPA2O14732 288 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 SERPINA5P05154 406 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 RPS17P08708 135 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 EMP2P54851 167 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ENPP6Q6UWR7 440 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■■■■ 28.2
PRPF40A-202ENST00000410080 KLHDC8AQ8IYD2 350 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 NIPA2Q8N8Q9 360 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 SYT3Q9BQG1 590 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 C1orf226A1L170 272 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 BCAT2O15382 392 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 DLX3O60479 287 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 SERPINA2P20848 420 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 GCGRP47871 477 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 PRKXP51817 358 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 RNF4P78317 190 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 MEP1AQ16819 746 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ZFP41Q8N8Y5 198 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 HUS1BQ8NHY5 278 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 NUDT22Q9BRQ3 303 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 HCFC1R1Q9NWW0 138 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 WIF1Q9Y5W5 379 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 PRSS51A0A1B0GVH4 220 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CREBL2O60519 120 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ARHGAP11AQ6P4F7 1023 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM246Q9BRR3 403 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 WWTR1Q9GZV5 400 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 HEBP1Q9NRV9 189 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 TM7SF3Q9NS93 570 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 FAIMQ9NVQ4 179 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 MYO5AQ9Y4I1 1855 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 TMX2-CTNND1H3BSU7 103 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 DLGAP1O14490 977 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 SGCEO43556 437 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 OXSR1O95747 527 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 C1GALT1C1LP0DN25 315 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CSNK1A1P48729 337 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 HK3P52790 923 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ACTC1P68032 377 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ACTA1P68133 377 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 INCA1Q0VD86 236 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 HEPHL1Q6MZM0 1159 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 MOB3CQ70IA8 216 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 NAT8LQ8N9F0 302 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 PAPD5Q8NDF8 572 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 OR1J4Q8NGS1 313 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF689Q96CS4 500 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CALHM2Q9HA72 323 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 C5AR2Q9P296 337 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 GPR52Q9Y2T5 361 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM14AQ9Y6G1 99 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 GSTP1P09211 210 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 ELK4P28324 431 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 POU4F2Q12837 409 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 OR11L1Q8NGX0 322 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CANT1Q8WVQ1 401 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CUTCQ9NTM9 273 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 USP36Q9P275 1121 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 RP1L1Q8IWN7 2480 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 STMND1H3BQB6 276 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 HNRNPA1P09651 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 NR4A2P43354 598 aa10.64□□□□□ -0.71
PRPF40A-202ENST00000410080 CLCN2P51788 898 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms