RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 YIPF4Q9BSR8 244 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 COPS4Q9BT78 406 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ARMC7Q9H6L4 198 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 EQTNQ9NQ60 294 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 RASSF1Q9NS23 344 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 C2orf42Q9NWW7 574 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 WARS2Q9UGM6 360 aaKnown RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 KLHL3Q9UH77 587 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 PCDHB10Q9UN67 800 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 WDR45Q9Y484 360 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 KRBA1A5PL33 1030 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 EFCAB10A6NFE3 127 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TLCD2A6NGC4 264 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TTC36A6NLP5 189 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 M0R3H8 397 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 AP3D1O14617 1153 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SLC22A1O15245 554 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 AQP9O43315 295 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 FGF17O60258 216 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 STX11O75558 287 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 OR5F1O95221 314 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 CDK1P06493 297 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PIPP12273 146 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 RNH1P13489 461 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TYRP1P17643 537 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ALDH4A1P30038 563 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 NXPH1P58417 271 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 OLR1P78380 273 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SHC2P98077 582 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ID3Q02535 119 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 CHRNEQ04844 493 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 MAP4K2Q12851 820 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PIN1Q13526 163 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TRAM2Q15035 370 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ZSWIM7Q19AV6 140 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PRICKLE4Q2TBC4 344 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 INAVAQ3KP66 663 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 UBE2UQ5VVX9 321 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 FAM111BQ6SJ93 734 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 FRRS1Q6ZNA5 592 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 LACC1Q8IV20 430 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ZNF595Q8IYB9 648 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SLC16A11Q8NCK7 471 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 OR4K5Q8NGD3 323 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 OR6C4Q8NGE1 309 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 OR52P1PQ8NH57 321 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 LMX1AQ8TE12 382 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 HOXB13Q92826 284 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 CTHRC1Q96CG8 243 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 DTNBP1Q96EV8 351 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SLC35A4Q96G79 324 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ZDHHC12Q96GR4 267 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ZNF578Q96N58 590 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 RSPO3Q9BXY4 272 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PRRG3Q9BZD7 231 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ZNF350Q9GZX5 532 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 KLHL25Q9H0H3 589 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 KRCC1Q9NPI7 259 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ACOT13Q9NPJ3 140 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 NECTIN3Q9NQS3 549 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 CLN6Q9NWW5 311 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ERVK-18Q9QC07 812 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 RHCGQ9UBD6 479 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ENPP5Q9UJA9 477 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PLCL2Q9UPR0 1127 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 CLCA2Q9UQC9 943 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 NINQ8N4C6 2090 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 A0A1W2PS29 197 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 FAM86C2PA6NEL3 165 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 AGAP5A6NIR3 686 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SLC9B1P1A6NJY1 282 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 CLDN4O14493 209 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 FMO6PO60774 539 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 GABARAPO95166 117 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 NSA2O95478 260 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 EPPINO95925 133 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 MT-ND2P03891 347 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 DBIP07108 87 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 POU2F1P14859 743 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 NT5EP21589 574 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 RPS4Y1P22090 263 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 MAP3K8P41279 467 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PDX1P52945 283 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 GP2P55259 537 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 MAZP56270 477 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 RGS8P57771 180 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TAS2R41P59536 307 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 NFATC3Q12968 1075 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TARDBPQ13148 414 aaKnown RBP eCLIP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SEC23BQ15437 767 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 C14orf28Q4W4Y0 310 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 WDR45BQ5MNZ6 344 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 ENTPD8Q5MY95 495 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 SLC25A30Q5SVS4 291 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 MEDAGQ5VYS4 303 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 C12orf73Q69YU5 71 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 LAIR1Q6GTX8 287 aa6.98□□□□□ -1.29
CXCR4-202ENST00000409817 TYW3Q6IPR3 259 aaKnown RBP6.98□□□□□ -1.29
CXCR4-202ENST00000409817 PODNL1Q6PEZ8 512 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms