RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 NDOR1Q9UHB4 597 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 SDK1Q7Z5N4 2213 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 EFCAB10A6NFE3 127 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 NKX2-2O95096 273 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 OR5F1O95221 314 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 BCL10O95999 233 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 RPS4Y1P22090 263 aaKnown RBP19.25■□□□□ 0.67
USP39-203ENST00000409470 TBCEQ15813 527 aaPredicted RBP19.25■□□□□ 0.67
USP39-203ENST00000409470 UBE2UQ5VVX9 321 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 GDF7Q7Z4P5 450 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 RANBP3LQ86VV4 465 aaPredicted RBP19.25■□□□□ 0.67
USP39-203ENST00000409470 OR51Q1Q8NH59 317 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 PIGXQ8TBF5 258 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 TRUB1Q8WWH5 349 aaKnown RBP19.25■□□□□ 0.67
USP39-203ENST00000409470 YIPF6Q96EC8 236 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 Q96MT0 163 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 FOLH1BQ9HBA9 442 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 TVP23BQ9NYZ1 205 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.25■□□□□ 0.67
USP39-203ENST00000409470 IGHV1OR21-1A0A087WYE8 117 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 OR2W5A6NFC9 320 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 NUDT21O43809 227 aaKnown RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 BRINP1O60477 761 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 ENTPD6O75354 484 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 BCAS1O75363 584 aaPredicted RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 NID1P14543 1247 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 S1PR1P21453 382 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 RNF144AP50876 292 aaPredicted RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 GINS1Q14691 196 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 MRPL2Q5T653 305 aaKnown RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 ZC3H14Q6PJT7 736 aaKnown RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 NKAIN4Q8IVV8 208 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 SLC25A45Q8N413 288 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 Q8N9G6 341 aaPredicted RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 PCDH15Q96QU1 1955 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 DUX1O43812 170 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 SOX30O94993 753 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 NTN1O95631 604 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 CDK4P11802 303 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 MAOAP21397 527 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 SSTR4P31391 388 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 OCA2Q04671 838 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 ZNF267Q14586 743 aaPredicted RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 CTF1Q16619 201 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 DECR1Q16698 335 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 SNAP47Q5SQN1 464 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 TSSK4Q6SA08 328 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 P2RY8Q86VZ1 359 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 SLC35F3Q8IY50 421 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 TCEANCQ8N8B7 351 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 OR8J1Q8NGP2 316 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 ACOT11Q8WXI4 607 aaPredicted RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 FAM46AQ96IP4 442 aaKnown RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 ARMC7Q9H6L4 198 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 CNOT2Q9NZN8 540 aaKnown RBP19.24■□□□□ 0.67
USP39-203ENST00000409470 CNIH4Q9P003 139 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 KCNE5Q9UJ90 142 aa19.24■□□□□ 0.67
USP39-203ENST00000409470 TP53BP1Q12888 1972 aaPredicted RBP19.23■□□□□ 0.67
USP39-203ENST00000409470 FITM1A5D6W6 292 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 H0YIG0 161 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 KCNK2O95069 426 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 GABARAPO95166 117 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 CD1CP29017 333 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 ZNF136P52737 540 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 IGLV3-21P80748 117 aaPredicted RBP19.23■□□□□ 0.67
USP39-203ENST00000409470 MLLT1Q03111 559 aaPredicted RBP19.23■□□□□ 0.67
USP39-203ENST00000409470 FLYWCH1Q4VC44 716 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 PLXDC1Q8IUK5 500 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 LMF2Q9BU23 707 aaKnown RBP19.23■□□□□ 0.67
USP39-203ENST00000409470 CNPPD1Q9BV87 410 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 YIPF2Q9BWQ6 316 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 ITPAQ9BY32 194 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 POLE3Q9NRF9 147 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 DNAJC27Q9NZQ0 273 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 SLC7A7Q9UM01 511 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 TMEM184BQ9Y519 407 aaPredicted RBP19.23■□□□□ 0.67
USP39-203ENST00000409470 CSNK1G3Q9Y6M4 447 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 MAU2Q9Y6X3 613 aa19.23■□□□□ 0.67
USP39-203ENST00000409470 HRKO00198 91 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 OR2B3O76000 313 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 THY1P04216 161 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 IFNA16P05015 189 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 GKN3PP0CG01 181 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 GLB1P16278 677 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 GIPRP48546 466 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 EMDP50402 254 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 SMSP52788 366 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 HSD11B2P80365 405 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 TSPAN31Q12999 210 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 AQP6Q13520 282 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 SPCS2Q15005 226 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 KIF18BQ86Y91 864 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 TEX47Q8TBZ9 253 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 HOXB13Q92826 284 aaPredicted RBP19.22■□□□□ 0.67
USP39-203ENST00000409470 PMM1Q92871 262 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 BCL7BQ9BQE9 202 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 EGLN3Q9H6Z9 239 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 ERVMER34-1Q9H9K5 563 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 CDHR4A6H8M9 788 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 TMEM150CB9EJG8 249 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms