RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 UPP1Q16831 310 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 UBE2NLQ5JXB2 153 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-203ENST00000409050 LANCL3Q6ZV70 420 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 CREB3L2Q70SY1 520 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 OR4E2Q8NGC2 313 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 RHOXF1Q8NHV9 184 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM163Q8TC26 289 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 STK35Q8TDR2 534 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 SLAMF9Q96A28 289 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 FCRL1Q96LA6 429 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 TEPSINQ96N21 525 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 SORCS2Q96PQ0 1159 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 LPAR4Q99677 370 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 SLC6A7Q99884 636 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF649Q9BS31 505 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 TIMM29Q9BSF4 260 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 PRMT8Q9NR22 394 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-203ENST00000409050 OLAHQ9NV23 265 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 KCNS2Q9ULS6 477 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 SNED1Q8TER0 1413 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ANHXE9PGG2 379 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SAP18O00422 153 aaKnown RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 BCAS1O75363 584 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ACTL6BO94805 426 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 CH25HO95992 272 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 JUNBP17275 347 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 TAGLN2P37802 199 aaKnown RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 MTNR1BP49286 362 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 NUMBP49757 651 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 RNF144AP50876 292 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 CATR1Q13166 79 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 FIGNL1Q6PIW4 674 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 HIST2H3AQ71DI3 136 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ACVR1CQ8NER5 493 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 OR5W2Q8NH69 310 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SH3YL1Q96HL8 342 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 PTCHD1Q96NR3 888 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ALG8Q9BVK2 526 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SLC19A3Q9BZV2 496 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 EMC7Q9NPA0 242 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 FAM212BQ9NTI7 297 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ASIC5Q9NY37 505 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 CPNE7Q9UBL6 633 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 AJAP1Q9UKB5 411 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 RARRES3Q9UL19 164 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF337Q9Y3M9 751 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 DNAJC15Q9Y5T4 150 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 MON2Q7Z3U7 1717 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 A0A1W2PQL4 384 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 KLRG2A4D1S0 409 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 EME2A4GXA9 379 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 TMEM200CA6NKL6 621 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 H3BMQ9 156 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 AP1G1O43747 822 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 IL33O95760 270 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 WDPCPO95876 746 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 P04436 131 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ALDOBP05062 364 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SERPINE2P07093 398 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 CFHP08603 1231 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF8P17098 575 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 PPT1P50897 306 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 UBE2NP61088 152 aaKnown RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 BDH1Q02338 343 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 TGFBR3Q03167 851 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF92Q03936 586 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF616Q08AN1 781 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 APOFQ13790 326 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 FAM122CQ6P4D5 195 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 BEND4Q6ZU67 534 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 CSNK2A3Q8NEV1 391 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 COG8Q96MW5 612 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SLC46A1Q96NT5 459 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 PEBP4Q96S96 227 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZFYVE21Q9BQ24 234 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SLC38A1Q9H2H9 487 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 TP53TG5Q9Y2B4 290 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 V9GY05 133 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 A0A1B0GVT2 93 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SLC22A23A1A5C7 686 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 GGT3PA6NGU5 568 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF705EA8MWA4 302 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 METTL15P1P0C7V9 234 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 IL1RNP18510 177 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 PRKACGP22612 351 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 BDKRB2P30411 391 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 CA5AP35218 305 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ETV4P43268 484 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 SLC11A1P49279 550 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 DGKEP52429 567 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ATP1B3P54709 279 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF691Q5VV52 312 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 TMEM236Q5W0B7 351 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ISCA2Q86U28 154 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF100Q8IYN0 542 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 FAM109AQ8N4B1 249 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 OR2T11Q8NH01 316 aa5.77□□□□□ -1.49
SCN1A-203ENST00000409050 FUBP1Q96AE4 644 aaKnown RBP5.77□□□□□ -1.49
SCN1A-203ENST00000409050 LIN37Q96GY3 246 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms