RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CDH26Q8IXH8 852 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 LINC00469Q8N7U9 141 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 OR52B6Q8NGF0 335 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 OR56B2PQ8NGI1 322 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 OR8J1Q8NGP2 316 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 CTNNBL1Q8WYA6 563 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 FAM3CQ92520 227 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 RPL3LQ92901 407 aaKnown RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ART4Q93070 314 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 NT5C3BQ969T7 300 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 COQ2Q96H96 371 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 FEM1AQ9BSK4 669 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 COMMD4Q9H0A8 199 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 VCPKMTQ9H867 229 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 DEPPQ9NTK1 212 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNHIT6Q9NWK9 470 aaKnown RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 NMRK1Q9NWW6 199 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 NDE1Q9NXR1 346 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 METP08581 1390 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF749O43361 778 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 B4GALT2O60909 372 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 PDE5AO76074 875 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 IGF1P05019 195 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 OR9G9P0C7N8 305 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 ADORA3P0DMS8 318 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 ANXA3P12429 323 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 XRCC1P18887 633 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 TBXA2RP21731 343 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 CD9P21926 228 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 PLA2G16P53816 162 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 HILS1P60008 231 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 OSTNP61366 133 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 BNIP1Q12981 228 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 TMEM187Q14656 261 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 CFAP221Q4G0U5 840 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 CAVIN4Q5BKX8 364 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 AGAP7PQ5VUJ5 663 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 TPGS2Q68CL5 300 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 PRR5LQ6MZQ0 368 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 GDPGP1Q6ZNW5 385 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 STOX1Q6ZVD7 989 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 MTERF4Q7Z6M4 381 aaKnown RBP4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 SYT14Q8NB59 555 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 BHLHE23Q8NDY6 225 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 OR1B1Q8NGR6 318 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 SSC4DQ8WTU2 575 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 MYLPFQ96A32 169 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 ATXN7L3BQ96GX2 97 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 ELMO2Q96JJ3 720 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 NSMCE3Q96MG7 304 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 FAM173AQ9BQD7 235 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 TTYH2Q9BSA4 534 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 GCOM2Q9BZD3 368 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 IL1RL2Q9HB29 575 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 FGF22Q9HCT0 170 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF446Q9NWS9 450 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 PIPOXQ9P0Z9 390 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 THAP10Q9P2Z0 257 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 CYTH4Q9UIA0 394 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 CRLS1Q9UJA2 301 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 SPACA6W5XKT8 324 aa4.04□□□□□ -1.76
HMGB1P13-201ENST00000406019 IGHV4-30-2A0A087WSY4 118 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 TRAV26-1A0A087WT03 109 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 MEX3AA1L020 520 aaKnown RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 CASQ2O14958 399 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 SNAP91O60641 907 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 TSC22D2O75157 780 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF254O75437 659 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZSCAN5DPP0CG00 497 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 POU3F4P49335 361 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 STK19P49842 368 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 BEX3Q00994 111 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 CHI3L2Q15782 390 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 CCL14Q16627 93 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 EXOC3L2Q2M3D2 409 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 MUC21Q5SSG8 566 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 ATF7IP2Q5U623 682 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 SYT10Q6XYQ8 523 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 LANCL3Q6ZV70 420 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 EFL1Q7Z2Z2 1120 aaKnown RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 LRRC49Q8IUZ0 686 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 CCDC65Q8IXS2 484 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 LRRC75A-AS1Q8N1F1 130 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 OR52J3Q8NH60 311 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 PIGCQ92535 297 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 WBP1Q96G27 269 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 TCEANC2Q96MN5 208 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 SYT15Q9BQS2 421 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 CABLES2Q9BTV7 478 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 GON7Q9BXV9 100 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 FN3KRPQ9HA64 309 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 DDX18Q9NVP1 670 aaKnown RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 HYPKQ9NX55 129 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 TAS2R16Q9NYV7 291 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 AIPL1Q9NZN9 384 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 SPATA7Q9P0W8 599 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 GALPQ9UBC7 116 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 SEC14L4Q9UDX3 406 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms