RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 RGNQ15493 299 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 FAM76BQ5HYJ3 339 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PTOV1Q86YD1 416 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 OR1S1Q8NH92 325 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ENKD1Q9H0I2 346 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ATP13A1Q9HD20 1204 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 TRPC4Q9UBN4 977 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 CA12O43570 354 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PRAF2O60831 178 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 REM1O75628 298 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 KRT33AO76009 404 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 LGALS2P05162 132 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 NME1P15531 152 aaKnown RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ZNF7P17097 686 aaPredicted RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PON3Q15166 354 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 FAM109BQ6ICB4 259 aaPredicted RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 SLC29A4Q7RTT9 530 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 HMGN2P46Q86SG4 172 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 MDGA1Q8NFP4 955 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 OR5M9Q8NGP3 310 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 SPRYD4Q8WW59 207 aaPredicted RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 SMIM14Q96QK8 99 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 VRK1Q99986 396 aaPredicted RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 EXOSC1Q9Y3B2 195 aaKnown RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ENPP4Q9Y6X5 453 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 SLC9B1P1A6NJY1 282 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 SOD1P00441 154 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 CLTBP09497 229 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 PIPP12273 146 aaPredicted RBP13.21□□□□□ -0.29
DUSP28-202ENST00000405954 CDH4P55283 916 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 OR10A3P58181 314 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 LRIF1Q5T3J3 769 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 FAM27D1Q5T7N8 215 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 TMEM71Q6P5X7 295 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 DPPA4Q7L190 304 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 FOXRED2Q8IWF2 684 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 OR52B4Q8NGK2 314 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 MED8Q96G25 268 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 WDR5P61964 334 aaKnown RBP13.21□□□□□ -0.29
DUSP28-202ENST00000405954 C3orf33Q6P1S2 294 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 PAPD4Q6PIY7 484 aaKnown RBP13.21□□□□□ -0.29
DUSP28-202ENST00000405954 FAM151BQ6UXP7 276 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 ZNF551Q7Z340 670 aaPredicted RBP13.21□□□□□ -0.29
DUSP28-202ENST00000405954 ARHGAP12Q8IWW6 846 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 PIANPQ8IYJ0 282 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 LRRC52Q8N7C0 313 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 TBC1D20Q96BZ9 403 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 SUCNR1Q9BXA5 334 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 UNKLQ9H9P5 680 aaKnown RBP13.21□□□□□ -0.29
DUSP28-202ENST00000405954 POLE3Q9NRF9 147 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 GULP1Q9UBP9 304 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 IL20RAQ9UHF4 553 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 PCDHGC4Q9Y5F7 938 aa13.21□□□□□ -0.29
DUSP28-202ENST00000405954 ARID1BQ8NFD5 2236 aaPredicted RBP13.21□□□□□ -0.3
DUSP28-202ENST00000405954 TRDV1A0A1B0GX56 115 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 MYBPHLA2RUH7 354 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 ADAP00813 363 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 RPIAP49247 311 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 RNF4P78317 190 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 DOC2BQ14184 412 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 KIAA0040Q15053 153 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 ACER2Q5QJU3 275 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 NPAS3Q8IXF0 933 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 BEST3Q8N1M1 668 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 SENP5Q96HI0 755 aaPredicted RBP13.21□□□□□ -0.3
DUSP28-202ENST00000405954 KCNJ15Q99712 375 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 PIGMQ9H3S5 423 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.3
DUSP28-202ENST00000405954 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 A0A1W2PRB8 838 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 MPTX1A8MV57 137 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 SC5DO75845 299 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 WNT1P04628 370 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
DUSP28-202ENST00000405954 CNR1P21554 472 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 NFYBP25208 207 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 AHRP35869 848 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 SMARCD3Q6STE5 483 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 IQCHQ86VS3 1027 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
DUSP28-202ENST00000405954 OR5M1Q8NGP8 315 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 CD200R1Q8TD46 325 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 FAIM2Q9BWQ8 316 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 AUNIPQ9H7T9 357 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 MIEF1Q9NQG6 463 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 CA10Q9NS85 328 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 FAM120CQ9NX05 1096 aaKnown RBP13.2□□□□□ -0.3
DUSP28-202ENST00000405954 DHCR7Q9UBM7 475 aaKnown RBP13.2□□□□□ -0.3
DUSP28-202ENST00000405954 KLF2Q9Y5W3 355 aaPredicted RBP13.2□□□□□ -0.3
DUSP28-202ENST00000405954 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 VNN2O95498 520 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 LATS1O95835 1130 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 TXNDC12O95881 172 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 MBP02144 154 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 DRD2P14416 443 aa13.2□□□□□ -0.3
DUSP28-202ENST00000405954 PNPLA4P41247 253 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms