RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MAP2K3P46734 347 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 PTSQ03393 145 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 SIGLEC14Q08ET2 396 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF763Q0D2J5 394 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 HEPACAMQ14CZ8 416 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 OCLNQ16625 522 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 FAM74A1Q5RGS3 127 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 APCDD1Q8J025 514 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 PEX11GQ96HA9 241 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 PKP4Q99569 1192 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 WRAP53Q9BUR4 548 aaKnown RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 GSDMCQ9BYG8 508 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 NKX6-2Q9C056 277 aaPredicted RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF436Q9C0F3 470 aaPredicted RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 CDCP1Q9H5V8 836 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF334Q9HCZ1 680 aaPredicted RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ACSL6Q9UKU0 697 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 TRBV4-1A0A0J9YWV2 114 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 METTL21EPA6NDL7 271 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 CPEP16870 476 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SPI1P17947 270 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 HNRNPKP61978 463 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC5A12Q1EHB4 618 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 LGALSLQ3ZCW2 172 aaPredicted RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZDHHC20Q5W0Z9 365 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 TRMT11Q7Z4G4 463 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 WFDC5Q8TCV5 224 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 PPCDCQ96CD2 204 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZC3HAV1LQ96H79 300 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SUV39H2Q9H5I1 410 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 TREM2Q9NZC2 230 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF106Q9H2Y7 1883 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 FAM227AF5H4B4 570 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 PPM1DO15297 605 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SOX14O95416 240 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 FGF2P09038 288 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 RPL3P39023 403 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC1A3P43003 542 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 PTGFRP43088 359 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 WDR5P61964 334 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 RPS13P62277 151 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF628Q5EBL2 1059 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 TRIQKQ629K1 86 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 ADNP2Q6IQ32 1131 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 AGTRAPQ6RW13 159 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 PAQR6Q6TCH4 344 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 NLRC3Q7RTR2 1065 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 KIAA0907Q7Z7F0 614 aaPredicted RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SOCS4Q8WXH5 440 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 LINC01599Q8WXQ3 324 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 RHOVQ96L33 236 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 COQ10AQ96MF6 247 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 NDRG2Q9UN36 371 aaKnown RBP15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 SCN8AQ9UQD0 1980 aa15.23■□□□□ 0.03
COL4A3BP-204ENST00000405807 ALPK3Q96L96 1907 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 FFAR1O14842 300 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 KDM4BO94953 1096 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 LALBAP00709 142 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC2A2P11168 524 aaPredicted RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 ATP5A1P25705 553 aaKnown RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 SDC2P34741 201 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 ELAVL2Q12926 359 aaKnown RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 DCST1Q5T197 706 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 RAET1GQ6H3X3 334 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 SERPINA13PQ6UXR4 307 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 RFLNAQ6ZTI6 216 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 LAPTM4BQ86VI4 370 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 TCEANCQ8N8B7 351 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 DUSP18Q8NEJ0 188 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 TMIEQ8NEW7 156 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 ATP6V1C2Q8NEY4 427 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 OR5AK3PQ8NH89 298 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 TRMT10AQ8TBZ6 339 aaKnown RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 TMEM203Q969S6 136 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 MED9Q9NWA0 146 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 RBFOX1Q9NWB1 397 aaKnown RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 MARCH5Q9NX47 278 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 RHPN2P1A8MT19 583 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 NEDD8-MDP1E9PL57 170 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 OR10H3O60404 316 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 LPLP06858 475 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 RPS2P15880 293 aaKnown RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 SSTR4P31391 388 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 REEP3Q6NUK4 255 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 PRSS55Q6UWB4 352 aaPredicted RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC6A18Q96N87 628 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 TMEM175Q9BSA9 504 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 POLR2J3Q9H1A7 115 aaKnown RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 NCOR1P1Q9H4R4 102 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 PISDQ9UG56 409 aa15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 DNMT3AQ9Y6K1 912 aaPredicted RBP15.22■□□□□ 0.03
COL4A3BP-204ENST00000405807 KIAA0355O15063 1070 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 RAB36O95755 333 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 RECKO95980 971 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 IGFBP1P08833 259 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 PVALBP20472 110 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 IRS1P35568 1242 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 GPR143P51810 404 aa15.21■□□□□ 0.03
COL4A3BP-204ENST00000405807 LIM2P55344 173 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms