RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 USE1Q9NZ43 259 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 COPS7AQ9UBW8 275 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 GPN3Q9UHW5 284 aaPredicted RBP19.48■□□□□ 0.71
TPM1-208ENST00000404484 KIAA0513O60268 411 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 DIRAS1O95057 198 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 LGI1O95970 557 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 DBIP07108 87 aaKnown RBP19.47■□□□□ 0.71
TPM1-208ENST00000404484 DCAF12Q5T6F0 453 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 LAPTM4BQ86VI4 370 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 MORN4Q8NDC4 146 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 SNIP1Q8TAD8 396 aaKnown RBP19.47■□□□□ 0.71
TPM1-208ENST00000404484 SLC2A12Q8TD20 617 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 G6PC3Q9BUM1 346 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 MKLN1Q9UL63 735 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 U3KQV3 271 aa19.47■□□□□ 0.71
TPM1-208ENST00000404484 IDSB3KWA1 339 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 C9J4A7 227 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 FCMRO60667 390 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 IGKV3-11P04433 115 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 RRM2P31350 389 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 EIF2S3P41091 472 aaKnown RBP19.46■□□□□ 0.71
TPM1-208ENST00000404484 IST1P53990 364 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 SLC37A1P57057 533 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 SPIBQ01892 262 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 MED21Q13503 144 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 CYP27C1Q4G0S4 372 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 OLIG3Q7RTU3 272 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 MAGEE2Q8TD90 523 aaPredicted RBP19.46■□□□□ 0.71
TPM1-208ENST00000404484 NR4A3Q92570 626 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 RMND5BQ96G75 393 aaPredicted RBP19.46■□□□□ 0.71
TPM1-208ENST00000404484 ZNF570Q96NI8 536 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 ULBP3Q9BZM4 244 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 OR8D2Q9GZM6 311 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 ARMC7Q9H6L4 198 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 SMPD3Q9NY59 655 aaPredicted RBP19.46■□□□□ 0.71
TPM1-208ENST00000404484 ZNF443Q9Y2A4 671 aaPredicted RBP19.46■□□□□ 0.71
TPM1-208ENST00000404484 AP4B1Q9Y6B7 739 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 CCDC88CQ9P219 2028 aa19.46■□□□□ 0.71
TPM1-208ENST00000404484 GXYLT2A0PJZ3 443 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 C7orf72A4D263 438 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 AGAP5A6NIR3 686 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 OR6C76A6NM76 312 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 A8MUA0 341 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 DENRO43583 198 aaKnown RBP19.45■□□□□ 0.7
TPM1-208ENST00000404484 ALOX12BO75342 701 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 KCNK2O95069 426 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 ZIC2O95409 532 aaPredicted RBP19.45■□□□□ 0.7
TPM1-208ENST00000404484 DDAH2O95865 285 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 CLPSP04118 112 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 ALPLP05186 524 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 RPS4Y1P22090 263 aaKnown RBP19.45■□□□□ 0.7
TPM1-208ENST00000404484 SLC5A2P31639 672 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 EMP2P54851 167 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 SMIM11AP58511 58 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 DCAF7P61962 342 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 EPS8Q12929 822 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 GPR68Q15743 365 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 LIN52Q52LA3 116 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 CCNJQ5T5M9 372 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 TSEN54Q7Z6J9 526 aaKnown RBP19.45■□□□□ 0.7
TPM1-208ENST00000404484 DCBLD2Q96PD2 775 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 EVA1AQ9H8M9 152 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 VNN3Q9NY84 501 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 C19orf25Q9UFG5 118 aaPredicted RBP19.45■□□□□ 0.7
TPM1-208ENST00000404484 OR10H1Q9Y4A9 318 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 ORC6Q9Y5N6 252 aa19.45■□□□□ 0.7
TPM1-208ENST00000404484 PRAMEF25A6NGN4 478 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 TNFRSF11BO00300 401 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 IL7RP16871 459 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 PPICP45877 212 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 EFNA3P52797 238 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 PSMD4P55036 377 aaKnown RBP19.44■□□□□ 0.7
TPM1-208ENST00000404484 PPP2R2BQ00005 443 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 RFX4Q33E94 735 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 MRPL14Q6P1L8 145 aaKnown RBP19.44■□□□□ 0.7
TPM1-208ENST00000404484 FIGNL1Q6PIW4 674 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 TBPL2Q6SJ96 375 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 VANGL1Q8TAA9 524 aaPredicted RBP19.44■□□□□ 0.7
TPM1-208ENST00000404484 ZNF721Q8TF20 911 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 ARHGDIGQ99819 225 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 DDA1Q9BW61 102 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 ITPAQ9BY32 194 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 QRSL1Q9H0R6 528 aaKnown RBP19.44■□□□□ 0.7
TPM1-208ENST00000404484 SOX17Q9H6I2 414 aaPredicted RBP19.44■□□□□ 0.7
TPM1-208ENST00000404484 C3orf18Q9UK00 162 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 GPR55Q9Y2T6 319 aaPredicted RBP19.44■□□□□ 0.7
TPM1-208ENST00000404484 TESMINQ9Y4I5 508 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 A0A087WV48 116 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 CD63P08962 238 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 CT45A8P0DMV1 189 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 CT45A9P0DMV2 189 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 ZNF28P17035 718 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 PIGAP37287 484 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 PSPHP78330 225 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 ZSWIM7Q19AV6 140 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 FLYWCH1Q4VC44 716 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 CT45A2Q5DJT8 189 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 NPSR1Q6W5P4 371 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 SHISA6Q6ZSJ9 500 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 TMEM179BQ7Z7N9 219 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms