RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 GATA2P23769 480 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 IL2RGP31785 369 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 CA8P35219 290 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 BDKRB1P46663 353 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 IFNAR2P48551 515 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 ARHGDIBP52566 201 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 RUNX3Q13761 415 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 PPP1R3AQ16821 1122 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 NADK2Q4G0N4 442 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 TCTEX1D4Q5JR98 221 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 RABGAP1LQ5R372 815 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF57Q68EA5 555 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 BLOC1S2Q6QNY1 142 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 CENPUQ71F23 418 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 GTSCR1Q86UQ5 136 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 VPS36Q86VN1 386 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZDHHC21Q8IVQ6 265 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 LINC01561Q8N1V8 128 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 ARL14Q8N4G2 192 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 OR2T33Q8NG76 320 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 NANPQ8TBE9 248 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 RPL3LQ92901 407 aaKnown RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 TOMM40LQ969M1 308 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 PINX1Q96BK5 328 aaKnown RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 WBP1Q96G27 269 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 VPS39Q96JC1 886 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 CASD1Q96PB1 797 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZBP1Q9H171 429 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 POLR3FQ9H1D9 316 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 AMBNQ9NP70 447 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 RAI14Q9P0K7 980 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 NTNG1Q9Y2I2 539 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 DHRS7Q9Y394 339 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 KIF3AQ9Y496 699 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 A0A1B0GWJ7 208 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 TRIM49BA6NDI0 452 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 FRG2CA6NGY1 282 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 TM9SF1O15321 606 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR1F1O43749 312 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZNF354AO60765 605 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 STX11O75558 287 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 ANP32DO95626 131 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 HPP00738 406 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 LAMP1P11279 417 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 GATA1P15976 413 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 UQCRC2P22695 453 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 PSMA5P28066 241 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR1D4P47884 311 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 OSTNP61366 133 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 DCAF4L1Q3SXM0 396 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 CELF3Q5SZQ8 465 aaKnown RBP3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 FAM182AQ5T1J6 154 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 LRRC8BQ6P9F7 803 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 HSD11B1LQ7Z5J1 315 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 CEACAM19Q7Z692 300 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 ARL6IP6Q8N6S5 226 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR2L2Q8NH16 312 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 NFKBIZQ9BYH8 718 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 COMMD4Q9H0A8 199 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 RIBC2Q9H4K1 309 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 ELOVL2Q9NXB9 296 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 CIDEBQ9UHD4 219 aa3.02□□□□□ -1.93
HMGB1P17-201ENST00000403495 TRBV7-9A0A0J9YWB2 115 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 G3V3Y1 287 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 H0YCG3 227 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 FCN1O00602 326 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 CPLX1O14810 134 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 LCMT2O60294 686 aaKnown RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 NOL4O94818 638 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 KBTBD11O94819 623 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 SLC2A10O95528 541 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 PRG2P13727 222 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 RPA2P15927 270 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ELK3P41970 407 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 VEGFCP49767 419 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ARFIP1P53367 373 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ERVPABLB-1P60509 514 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 IL9RQ01113 521 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 EWSR1Q01844 656 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 PAX2Q02962 417 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 RGS1Q08116 209 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 PUDPQ08623 228 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 TAF7Q15545 349 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ANKDD1AQ495B1 522 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 SEL1L3Q68CR1 1132 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 SCYL2Q6P3W7 929 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 TMEM184AQ6ZMB5 413 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 MCOLN2Q8IZK6 566 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 FGFRL1Q8N441 504 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 GMCL1P1Q8NEA9 526 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR5AU1Q8NGC0 362 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 PNPT1Q8TCS8 783 aaKnown RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ADAMTS16Q8TE57 1224 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 FAM222BQ8WU58 562 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 TRIM44Q96DX7 344 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZBED6CLQ96FA7 236 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 AKR1E2Q96JD6 320 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms