RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 F3P13726 295 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 CPMP14384 443 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 DRD2P14416 443 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 NOS3P29474 1203 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 HSD17B2P37059 387 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 PXNP49023 591 aaPredicted RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 PGDP52209 483 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 HNRNPFP52597 415 aaKnown RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 HMGA2P52926 109 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 DLX2Q07687 328 aaPredicted RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 ZNF155Q12901 538 aaPredicted RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 E2F2Q14209 437 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 DUSP5Q16690 384 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 NDUFAF6Q330K2 333 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 C6orf183Q5T699 404 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 AGAP7PQ5VUJ5 663 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 SLC48A1Q6P1K1 146 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 ARL9Q6T311 187 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 ASPGQ86U10 573 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 NRROSQ86YC3 692 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 OR56A1Q8NGH5 318 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 APOBEC4Q8WW27 367 aaKnown RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 RASSF5Q8WWW0 418 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 RLN3Q8WXF3 142 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 TM9SF4Q92544 642 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 SLC41A3Q96GZ6 507 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 PRRC1Q96M27 445 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 RIPOR3Q96MK2 946 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 PTCHD1Q96NR3 888 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 IL21RQ9HBE5 538 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 ACSS1Q9NUB1 689 aaPredicted RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 FKBP14Q9NWM8 211 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 TXNL4BQ9NX01 149 aaKnown RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 NLGN3Q9NZ94 848 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 HCN3Q9P1Z3 774 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 ZNF624Q9P2J8 865 aaPredicted RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 KCND3Q9UK17 655 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 WBP11Q9Y2W2 641 aaKnown RBP4.08□□□□□ -1.76
SMC6-203ENST00000402989 COLEC10Q9Y6Z7 277 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 TRIOBPQ9H2D6 2365 aa4.08□□□□□ -1.76
SMC6-203ENST00000402989 B4DGG1 531 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 PSMD9O00233 223 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SLC30A4O14863 429 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 PROM1O43490 865 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SLITRK5O94991 958 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 ZIC2O95409 532 aaPredicted RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 CLUP10909 449 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 IMPDH2P12268 514 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 APEX1P27695 318 aaKnown RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 NTSR1P30989 418 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 GABRA3P34903 492 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 UGT2B10P36537 528 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 CCR4P51679 360 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 CD83Q01151 205 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SLC3A1Q07837 685 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 ST3GAL3Q11203 375 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 RUNX2Q13950 521 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 IL18Q14116 193 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 GPR18Q14330 331 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 TRAM2Q15035 370 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SF3B4Q15427 424 aaKnown RBP eCLIP4.07□□□□□ -1.761e-7■□□□□ 11.3
SMC6-203ENST00000402989 MAPK14Q16539 360 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 ZNF181Q2M3W8 571 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 PUS10Q3MIT2 529 aaKnown RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 LRIT3Q3SXY7 679 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 FAM27D1Q5T7N8 215 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 ZNF57Q68EA5 555 aaPredicted RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 MTFR2Q6P444 385 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 POMZP3Q6PJE2 187 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SLC36A4Q6YBV0 504 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 VN1R4Q7Z5H5 301 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 PEX5LQ8IYB4 626 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 PRSS58Q8IYP2 241 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 LRRC25Q8N386 305 aaPredicted RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 OR4K14Q8NGD5 310 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 OR4Q3Q8NH05 313 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 UFD1Q92890 307 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 RERGQ96A58 199 aaPredicted RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 BCL7BQ9BQE9 202 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 TTYH2Q9BSA4 534 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 IFT27Q9BW83 186 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 C1QTNF7Q9BXJ2 289 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 CDCA4Q9BXL8 241 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SLC28A3Q9HAS3 691 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SLC25A19Q9HC21 320 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 CLDND1Q9NY35 253 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 CNOT2Q9NZN8 540 aaKnown RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 SEC14L4Q9UDX3 406 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SNX7Q9UNH6 387 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 ZNF232Q9UNY5 417 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 MRPS7Q9Y2R9 242 aaKnown RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 CMAHPQ9Y471 501 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 TP53BP1Q12888 1972 aaPredicted RBP4.07□□□□□ -1.76
SMC6-203ENST00000402989 CXorf51AA0A1B0GTR3 108 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 GXYLT2A0PJZ3 443 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 SAGE2PA6NJ88 616 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 LRRN3E7EW58 273 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 K7EQS6 105 aa4.07□□□□□ -1.76
SMC6-203ENST00000402989 CDC42EP2O14613 210 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms