RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 MENTQ9BUN1 341 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 B3GNT2Q9NY97 397 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 MRPL15Q9P015 296 aaKnown RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 FRS3O43559 492 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 CHP2O43745 196 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 ELK1P19419 428 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 M6PRP20645 277 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 MAT2AP31153 395 aaKnown RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 NUDT1P36639 197 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 MAPK9P45984 424 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 CLDN20P56880 219 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 RGS1Q08116 209 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 MLLT11Q13015 90 aaPredicted RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 EXOSC2Q13868 293 aaKnown RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 MLF2Q15773 248 aaPredicted RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 DCST1Q5T197 706 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 TANGO2Q6ICL3 276 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 KIAA1161Q6NSJ0 714 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 BHLHB9Q6PI77 547 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 KANSL1Q7Z3B3 1105 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 PROKR2Q8NFJ6 384 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 OR5K2Q8NHB8 316 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 APOBEC4Q8WW27 367 aaKnown RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 SMPDL3AQ92484 453 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 UBE2E3Q969T4 207 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 NEURL3Q96EH8 262 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 INSM2Q96T92 566 aaPredicted RBP13.23□□□□□ -0.29
ATG3-202ENST00000402314 DPH7Q9BTV6 452 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 EGLN3Q9H6Z9 239 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 RDH8Q9NYR8 311 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 REV1Q9UBZ9 1251 aa13.23□□□□□ -0.29
ATG3-202ENST00000402314 A0A1W2PP55 124 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 PGRMC2O15173 223 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 NDUFS4O43181 175 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 VEGFDO43915 354 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 PROS1P07225 676 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 OSMP13725 252 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 DRD5P21918 477 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 DUSP2Q05923 314 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 GALEQ14376 348 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SLC7A13Q8TCU3 470 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SETD7Q8WTS6 366 aaKnown RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 DNAJA4Q8WW22 397 aaPredicted RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 COX14Q96I36 57 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 ASB16Q96NS5 453 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 TREX2Q9BQ50 279 aaPredicted RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 TMEM43Q9BTV4 400 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 RBCK1Q9BYM8 510 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SLC7A5P2Q9GIP4 190 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SEMA3GQ9NS98 782 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SPATA2Q9UM82 520 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 ING4Q9UNL4 249 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 CLCA2Q9UQC9 943 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SYNDIG1LA6NDD5 238 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 IFNA14P01570 189 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 HNRNPA1P09651 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATG3-202ENST00000402314 SLC35G4P0C7Q5 338 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 NR2F6P10588 404 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 ATP6V1E1P36543 226 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 RPL3P39023 403 aaKnown RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 SSR2P43308 183 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 CCR8P51685 355 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SNRPNP63162 240 aaKnown RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 FGL2Q14314 439 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SYT14P1Q58G82 188 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 METRNLQ641Q3 311 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 OR8K5Q8NH50 307 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 ST8SIA2Q92186 375 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 GPA33Q99795 319 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 TRMT61BQ9BVS5 477 aaKnown RBP13.22□□□□□ -0.29
ATG3-202ENST00000402314 OR51I1Q9H343 314 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 AHSPQ9NZD4 102 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 SEC14L3Q9UDX4 400 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
ATG3-202ENST00000402314 TRIM77I1YAP6 450 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 NFATC1O95644 943 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 TFPIP10646 304 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
ATG3-202ENST00000402314 CCR6P51684 374 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 MAP2K6P52564 334 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 TAGLNQ01995 201 aaKnown RBP13.21□□□□□ -0.29
ATG3-202ENST00000402314 ZNF765Q7L2R6 523 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 OR5P2Q8WZ92 322 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 FCRL4Q96PJ5 515 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 TRAF4Q9BUZ4 470 aaPredicted RBP13.21□□□□□ -0.29
ATG3-202ENST00000402314 GLIPR2Q9H4G4 154 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 EQTNQ9NQ60 294 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 ZCCHC3Q9NUD5 404 aaKnown RBP13.21□□□□□ -0.29
ATG3-202ENST00000402314 KCNE3Q9Y6H6 103 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 A0A1W2PPK0 400 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms