RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ELAVL1Q15717 326 aaKnown RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 LIN52Q52LA3 116 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 ZNF385CQ66K41 422 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 PPP1R3BQ86XI6 285 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 ZSCAN1Q8NBB4 408 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 CLIP3Q96DZ5 547 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 MRPS26Q9BYN8 205 aaKnown RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 Q9N2J8 555 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 PRODH2Q9UF12 536 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 MKL2Q9ULH7 1088 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 NDRG4Q9ULP0 352 aaKnown RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 SPEGQ15772 3267 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 COL5A1P20908 1838 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 FAAHO00519 579 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 FLRT2O43155 660 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 OXSR1O95747 527 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 DDAH2O95865 285 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 GASTP01350 101 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 IGKV3-11P04433 115 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 GP1BAP07359 652 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 NID1P14543 1247 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 TPD52P55327 224 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 SLC37A1P57057 533 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 CD47Q08722 323 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 NSDHLQ15738 373 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 NNATQ16517 81 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 NKAIN1Q4KMZ8 207 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 EIPR1Q53HC9 387 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 RHBDD1Q8TEB9 315 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 PITX2Q99697 317 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 WDFY4Q6ZS81 3184 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 SH3PXD2BA1X283 911 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 EFCAB7A8K855 629 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 CSTF2P33240 577 aaKnown RBP eCLIP23.74■■□□□ 1.392e-45■■■■■ 66.1
CPNE1-205ENST00000401607 RYKP34925 604 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 RFX3P48380 749 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 FOXL2P58012 376 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 HOXC5Q00444 222 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 CTU2Q2VPK5 515 aaKnown RBP23.74■■□□□ 1.39
CPNE1-205ENST00000401607 FLYWCH1Q4VC44 716 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 MRPL2Q5T653 305 aaKnown RBP23.74■■□□□ 1.39
CPNE1-205ENST00000401607 RNF220Q5VTB9 566 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 PLPP5Q8NEB5 264 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 C7orf57Q8NEG2 295 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 TSPAN14Q8NG11 270 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 STT3BQ8TCJ2 826 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 SLC2A12Q8TD20 617 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 ZNF721Q8TF20 911 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 DIO2Q92813 273 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 GTPBP3Q969Y2 492 aaKnown RBP23.74■■□□□ 1.39
CPNE1-205ENST00000401607 ING2Q9H160 280 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 CLCA3PQ9Y6N3 262 aa23.74■■□□□ 1.39
CPNE1-205ENST00000401607 TTC36A6NLP5 189 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 GDF9O60383 454 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 FGF5P12034 268 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 POU2F1P14859 743 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 PLAURQ03405 335 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 PODNL1Q6PEZ8 512 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 BMPERQ8N8U9 685 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 FBLIM1Q8WUP2 373 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 NR4A3Q92570 626 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 FKBP10Q96AY3 582 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 OR8D2Q9GZM6 311 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 NTNG1Q9Y2I2 539 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 GMPPBQ9Y5P6 360 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 CPSF4LA6NMK7 179 aaKnown RBP23.73■■□□□ 1.39
CPNE1-205ENST00000401607 ONECUT2O95948 504 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 ATP6V1B1P15313 513 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 RNF144AP50876 292 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-205ENST00000401607 ZNF136P52737 540 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 TAS2R41P59536 307 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 RPP38P78345 283 aaKnown RBP23.73■■□□□ 1.39
CPNE1-205ENST00000401607 MEP1AQ16819 746 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 LAIR2Q6ISS4 152 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 SHISA6Q6ZSJ9 500 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 CTRCQ99895 268 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 ZNF556Q9HAH1 456 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 C11orf16Q9NQ32 467 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 SEMA4GQ9NTN9 838 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 CBLCQ9ULV8 474 aa23.73■■□□□ 1.39
CPNE1-205ENST00000401607 COL27A1Q8IZC6 1860 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-205ENST00000401607 CDHR4A6H8M9 788 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 DYRK3O43781 588 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 BCAS1O75363 584 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-205ENST00000401607 TFAP2AP05549 437 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 ZGLP1P0C6A0 271 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 CCNYL3P0C7X3 344 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 RPS6KA3P51812 740 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 CDH15P55291 814 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 DCDP81605 110 aaKnown RBP23.72■■□□□ 1.39
CPNE1-205ENST00000401607 ENTPD8Q5MY95 495 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 PGBD2Q6P3X8 592 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 Q6ZPB1 254 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-205ENST00000401607 LANCL3Q6ZV70 420 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 CCDC71Q8IV32 467 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-205ENST00000401607 PARP8Q8N3A8 854 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 MORN4Q8NDC4 146 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 MCHR1Q99705 422 aa23.72■■□□□ 1.39
CPNE1-205ENST00000401607 YTHDF1Q9BYJ9 559 aaKnown RBP23.72■■□□□ 1.39
CPNE1-205ENST00000401607 SEC16AO15027 2179 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms