RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 KCNE5Q9UJ90 142 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 NPIPA5A0A0B4J1W7 369 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 NPIPA7E9PJI5 369 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 ICOSLGO75144 302 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 SLC25A12O75746 678 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 H6PDO95479 791 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 NPIPA8P0DM63 369 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 KRT20P35900 424 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CASRP41180 1078 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 MNAT1P51948 309 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 SLC7A2P52569 658 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 TXNL4AP83876 142 aaKnown RBP14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CHRNEQ04844 493 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 BNIP1Q12981 228 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 GPAT3Q53EU6 434 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 ATAD3BQ5T9A4 648 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 SLC22A10Q63ZE4 541 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 Q6ZS92 163 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 SERPINA11Q86U17 422 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CALHM3Q86XJ0 350 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 GOLM1Q8NBJ4 401 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 PSD4Q8NDX1 1056 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 GRHL3Q8TE85 626 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 TM9SF4Q92544 642 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 TRNT1Q96Q11 434 aaKnown RBP14.63□□□□□ -0.07
HMGA1-204ENST00000401473 ECSITQ9BQ95 431 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 G6PC3Q9BUM1 346 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF350Q9GZX5 532 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 SLC38A1Q9H2H9 487 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 DEPPQ9NTK1 212 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CORO2BQ9UQ03 480 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 LIPT1Q9Y234 373 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 DNAJC13O75165 2243 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 MED12Q93074 2177 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 CENPVL1A0A0U1RR11 272 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 ADAM10O14672 748 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 ABCB7O75027 752 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 STX11O75558 287 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 BCHEP06276 602 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 SP1P08047 785 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 NR2F1P10589 423 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 PTGDSP41222 190 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 CASP3P42574 277 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 ANXA11P50995 505 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 PSMD4P55036 377 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 PLEKHN1Q494U1 663 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 NADK2Q4G0N4 442 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 COLEC12Q5KU26 742 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 PRAMEF20Q5VT98 475 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 TYW3Q6IPR3 259 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 FRRS1Q6ZNA5 592 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 RTL4Q6ZR62 310 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 GPALPP1Q8IXQ4 340 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 DND1Q8IYX4 353 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 SPPL2AQ8TCT8 520 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 RNF138Q8WVD3 245 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 SLC39A7Q92504 469 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 SLC7A6OSQ96CW6 309 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 TMEM19Q96HH6 336 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 RSPO3Q9BXY4 272 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 SAP130Q9H0E3 1048 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 QRSL1Q9H0R6 528 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 TMEM38AQ9H6F2 299 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 A4GALTQ9NPC4 353 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 RYDENQ9NUL5 291 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 TMEM181Q9P2C4 612 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 ABCD2Q9UBJ2 740 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 P2RX2Q9UBL9 471 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 MRTO4Q9UKD2 239 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 PACSIN3Q9UKS6 424 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 CNOT11Q9UKZ1 510 aaKnown RBP14.62□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF407Q9C0G0 2248 aa14.62□□□□□ -0.07
HMGA1-204ENST00000401473 C2orf72A6NCS6 295 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 G3V3Y1 287 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 FADS1O60427 444 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 UTS2O95399 124 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 INPP5JQ15735 1006 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-204ENST00000401473 GPR68Q15743 365 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 GRAMD1BQ3KR37 738 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 GCNT6Q5T4J0 391 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 GALNTL5Q7Z4T8 443 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 NET1Q7Z628 596 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-204ENST00000401473 HMGN2P46Q86SG4 172 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 DEFB107AQ8IZN7 70 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 PGAM4Q8N0Y7 254 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 NTNG2Q96CW9 530 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 SCMH1Q96GD3 660 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 TREX2Q9BQ50 279 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-204ENST00000401473 GALNT9Q9HCQ5 603 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 THUMPD1Q9NXG2 353 aaKnown RBP14.61□□□□□ -0.07
HMGA1-204ENST00000401473 B3GNT3Q9Y2A9 372 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 WDR45Q9Y484 360 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 A0A0G2JMM0 328 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 A0A1W2PPB8 328 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 A0A1W2PRS3 328 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 C17orf51A8MQB3 221 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 KIR3DP1A8MWS1 328 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 NPIPB9F8W1W9 429 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 TP53I11O14683 189 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 SLC28A2O43868 658 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms