RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 DDIT4LQ96D03 193 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 TIMM29Q9BSF4 260 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 HHATLQ9HCP6 504 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 ACOT13Q9NPJ3 140 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 MRPL15Q9P015 296 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 RAD51DO75771 328 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 ERCC1P07992 297 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-204ENST00000400337 HBQ1P09105 142 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 CDNFQ49AH0 187 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 XKRXQ6PP77 449 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 SHISA6Q6ZSJ9 500 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF611Q8N823 705 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 NINJ1Q92982 152 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 NEDD4LQ96PU5 975 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 AIFM2Q9BRQ8 373 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 CPNE7Q9UBL6 633 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 WASF3Q9UPY6 502 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 SPEF1Q9Y4P9 236 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 SYPP08247 313 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 SELENOVP59797 346 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 TMPPEQ6ZT21 453 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 TFAP2CQ92754 450 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 ZMYND19Q96E35 227 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-204ENST00000400337 CRB3Q9BUF7 120 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 RDH8Q9NYR8 311 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 PHYHO14832 338 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 B4GAT1O43505 415 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 EEF1A1P5Q5VTE0 462 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 LSMEM2Q8N112 164 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 C2orf42Q9NWW7 574 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-204ENST00000400337 NUP50Q9UKX7 468 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF806P0C7X5 589 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 SELPLGQ14242 412 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 GPR137CQ8N3F9 429 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 ABCG2Q9UNQ0 655 aa17.15■□□□□ 0.34
COL18A1-204ENST00000400337 ANXA3P12429 323 aa17.14■□□□□ 0.34
COL18A1-204ENST00000400337 CTBP2P56545 445 aa17.14■□□□□ 0.34
COL18A1-204ENST00000400337 EXOSC7Q15024 291 aaKnown RBP17.14■□□□□ 0.34
COL18A1-204ENST00000400337 DCST2Q5T1A1 773 aa17.14■□□□□ 0.34
COL18A1-204ENST00000400337 RBM12BQ8IXT5 1001 aaKnown RBP17.14■□□□□ 0.34
COL18A1-204ENST00000400337 ARHGAP9Q9BRR9 750 aa17.14■□□□□ 0.34
COL18A1-204ENST00000400337 POTEKPQ9BYX7 375 aa17.14■□□□□ 0.34
COL18A1-204ENST00000400337 TMEM185BQ9H7F4 350 aa17.14■□□□□ 0.34
COL18A1-204ENST00000400337 MYH9P35579 1960 aaKnown RBP17.14■□□□□ 0.33
COL18A1-204ENST00000400337 A6NCN8 305 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 GNAO1P09471 354 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 CD3GP09693 182 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 FUT1P19526 365 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 POU3F4P49335 361 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 WNT4P56705 351 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 PRPS1P60891 318 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 HBA1P69905 142 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 INSM2Q96T92 566 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-204ENST00000400337 H3BML4 177 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 LRRTM2O43300 516 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 BAIAP2L2Q6UXY1 529 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 GPR149Q86SP6 731 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 OR52R1Q8NGF1 315 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 OR5J2Q8NH18 312 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF597Q96LX8 424 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 OR4K3Q96R72 315 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 ALG8Q9BVK2 526 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF43P17038 809 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 PRDX1Q06830 199 aaKnown RBP17.14■□□□□ 0.33
COL18A1-204ENST00000400337 SLC5A12Q1EHB4 618 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 A8MVJ9 347 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 FBP2O00757 339 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 UGT2B10P36537 528 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 TLE3Q04726 772 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 NTRK2Q16620 822 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 CCNJQ5T5M9 372 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 UGT2A3Q6UWM9 527 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 PRRC1Q96M27 445 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 GLS2Q9UI32 602 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 IER3IP1Q9Y5U9 82 aa17.14■□□□□ 0.33
COL18A1-204ENST00000400337 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-204ENST00000400337 M0R233 179 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 H2AFB2P0C5Z0 115 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 ART1P52961 327 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 UEVLDQ8IX04 471 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 SLC15A4Q8N697 577 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 FNDC8Q8TC99 324 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 HOXB13Q92826 284 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-204ENST00000400337 ZNF471Q9BX82 626 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-204ENST00000400337 INTS6Q9UL03 887 aaKnown RBP17.13■□□□□ 0.33
COL18A1-204ENST00000400337 FAM227AF5H4B4 570 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 F3P13726 295 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 SFTPDP35247 375 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 TRA2BP62995 288 aaKnown RBP17.13■□□□□ 0.33
COL18A1-204ENST00000400337 PIP5KL1Q5T9C9 394 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 TANGO2Q6ICL3 276 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 CBLL1Q75N03 491 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 NLGN4YQ8NFZ3 816 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-204ENST00000400337 OR5AK2Q8NH90 309 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 OR14L1PQ8NHC6 308 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 TACR1P25103 407 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 PTGS2P35354 604 aa17.13■□□□□ 0.33
COL18A1-204ENST00000400337 NFATC4Q14934 902 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms