RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 PPP2CBP62714 309 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 RPS21P63220 83 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PPP2CAP67775 309 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CFHR1Q03591 330 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PPIDQ08752 370 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 GRIK2Q13002 908 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TFDP2Q14188 446 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SELPLGQ14242 412 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRKD1Q15139 912 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CYP1B1Q16678 543 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 C2orf68Q2NKX9 166 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF284Q2VY69 593 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TMEM52BQ4KMG9 183 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 LACTB2Q53H82 288 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TFDP3Q5H9I0 405 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TSTD2Q5T7W7 516 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 WLSQ5T9L3 541 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 STPG1Q5TH74 334 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MARC1Q5VT66 337 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TTC23Q5W5X9 447 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SYT10Q6XYQ8 523 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PIP4P1Q86T03 277 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ANKRD46Q86W74 232 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 HORMAD1Q86X24 394 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 LRRC8AQ8IWT6 810 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ARHGAP24Q8N264 748 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PGBD5Q8N414 524 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF808Q8N4W9 903 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ATPAF2Q8N5M1 289 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF611Q8N823 705 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ASCC1Q8N9N2 400 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SPATA4Q8NEY3 305 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 GJC3Q8NFK1 279 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 OR6K2Q8NGY2 324 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MITD1Q8WV92 249 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MCHR2Q969V1 340 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SGK3Q96BR1 496 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MOB3AQ96BX8 217 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 HAVCR1Q96D42 359 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 RBM41Q96IZ5 413 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 NSMCE3Q96MG7 304 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TEFMQ96QE5 360 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CCNL2Q96S94 520 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 IL12RB2Q99665 862 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PCGF1Q9BSM1 259 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TMEM43Q9BTV4 400 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ABHD14AQ9BUJ0 271 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 IFT27Q9BW83 186 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 WWTR1Q9GZV5 400 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 RAD21L1Q9H4I0 556 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ATP13A3Q9H7F0 1226 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MEAF6Q9HAF1 191 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CD300AQ9UGN4 299 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 HYOU1Q9Y4L1 999 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ATG4BQ9Y4P1 393 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 HS3ST3A1Q9Y663 406 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 OAS3Q9Y6K5 1087 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 RNF215Q9Y6U7 377 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SPEGQ15772 3267 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ANKRD11Q6UB99 2663 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 EPG5Q9HCE0 2579 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 A0A1B0GVT2 93 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 GRID2IPA4D2P6 1211 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 IQCF5A8MTL0 148 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 MIF4GDA9UHW6 222 aaKnown RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 FAM157AC9JC47 383 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 GOLGA8TH3BQL2 631 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ZNF701M0R085 212 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 PRYO14603 147 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 MAGEC1O60732 1142 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ZFPL1O95159 310 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 PIGNO95427 931 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 HLA-DQA2P01906 255 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CHRNGP07510 517 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ADH4P08319 380 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 IGFBP1P08833 259 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 RFPL3SP0C7P2 107 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 STAG3L2P0CL84 134 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 PNMTP11086 282 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CD59P13987 128 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 TGM2P21980 687 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ITPKBP27987 946 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 MMP12P39900 470 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 PTGFRP43088 359 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ALDH3B1P43353 468 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 MARCKSL1P49006 195 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CSNK1EP49674 416 aaKnown RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 MAPK12P53778 367 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 UBE2IP63279 158 aaKnown RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 SIM1P81133 766 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CCZ1BP86790 482 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CCZ1P86791 482 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CDK3Q00526 305 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 CACNG1Q06432 222 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 SLC34A1Q06495 639 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 BCL2L1Q07817 233 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ASPHQ12797 758 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 ZNF235Q14590 738 aa4.96□□□□□ -1.62
HMGB3P7-201ENST00000400214 IHHQ14623 411 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms