RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 NEURL3Q96EH8 262 aa12.67□□□□□ -0.38
SIRPA-203ENST00000400068 TRNT1Q96Q11 434 aaKnown RBP12.67□□□□□ -0.38
SIRPA-203ENST00000400068 TM9SF2Q99805 663 aa12.67□□□□□ -0.38
SIRPA-203ENST00000400068 TIMM29Q9BSF4 260 aa12.67□□□□□ -0.38
SIRPA-203ENST00000400068 ZSCAN32Q9NX65 697 aa12.67□□□□□ -0.38
SIRPA-203ENST00000400068 OR6C2Q9NZP2 312 aa12.67□□□□□ -0.38
SIRPA-203ENST00000400068 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 A6NIN4 97 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 HMGN4O00479 90 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 ADORA3P0DMS8 318 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 SLC15A1P46059 708 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 CSTF1Q05048 431 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 CRYZQ08257 329 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 PAQR6Q6TCH4 344 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 ZNF574Q6ZN55 896 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 COMMD2Q86X83 199 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 PHC2Q8IXK0 858 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 OR4F15Q8NGB8 312 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 FANK1Q8TC84 345 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 TRUB1Q8WWH5 349 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 C11orf24Q96F05 449 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 SLC41A3Q96GZ6 507 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 MED20Q9H944 212 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 ADAM30Q9UKF2 790 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 ZFR2Q9UPR6 939 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 POLR1DQ9Y2S0 133 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 CORINQ9Y5Q5 1042 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 RAB36O95755 333 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 UGT2B7P16662 529 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 MTNR1AP48039 350 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 NKX2-5P52952 324 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 SLC35A2P78381 396 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 AQP6Q13520 282 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 NFATC4Q14934 902 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 PLAG1Q6DJT9 500 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 HDDC2Q7Z4H3 204 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 PRR22Q8IZ63 422 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 HCAR2Q8TDS4 363 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 ZDHHC1Q8WTX9 485 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 MS4A6EQ96DS6 147 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 CFHR5Q9BXR6 569 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 PRTFDC1Q9NRG1 225 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 GIPRP48546 466 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 TPMTP51580 245 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 TFF2Q03403 129 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 ZNF91Q05481 1191 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 CLPPQ16740 277 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 TRMT12Q53H54 448 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 BEX2Q9BXY8 128 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
SIRPA-203ENST00000400068 Q9N2J8 555 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 NECTIN3Q9NQS3 549 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 LIPT1Q9Y234 373 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 KCNE3Q9Y6H6 103 aa12.66□□□□□ -0.38
SIRPA-203ENST00000400068 LOC105369274A0A096LPK9 316 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 LOC102723532A0A0G2JNH3 316 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ELOA3DA6NLF2 546 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 STX11O75558 287 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 RGS6P49758 472 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ELOA3BQ3SY89 546 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 PLET1Q6UQ28 207 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 RTL10Q7L3V2 364 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 IZUMO1Q8IYV9 350 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 OR4N4Q8N0Y3 316 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ELOA3Q8NG57 546 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 SLC30A2Q9BRI3 323 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 CDADC1Q9BWV3 514 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 SAP130Q9H0E3 1048 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 C6orf106Q9H6K1 298 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 CACNA1EQ15878 2313 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 A0A0G2JPF8 293 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 HNRNPCL3B7ZW38 293 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 TMEM150CB9EJG8 249 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 PLD2O14939 933 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 HMGN1P05114 100 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 HNRNPCL4P0DMR1 293 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ELAVL4P26378 380 aaKnown RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ACVR2AP27037 513 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 BCAP31P51572 246 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 PDX1P52945 283 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 QPRTQ15274 297 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ENTPD8Q5MY95 495 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ANKK1Q8NFD2 765 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 LILRB1Q8NHL6 650 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 AP3S1Q92572 193 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ERMAPQ96PL5 475 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-203ENST00000400068 AIFM2Q9BRQ8 373 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 SCPEP1Q9HB40 452 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 RP1P56715 2156 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 CDC14CA4D256 554 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 ANGPT1Q15389 498 aa12.65□□□□□ -0.38
SIRPA-203ENST00000400068 MZT2AQ6P582 158 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms