RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 GPR160Q9UJ42 338 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 PCDHB11Q9Y5F2 797 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13□□□□□ -0.33
RUNX3-203ENST00000399916 H7C0S8 307 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 AIPO00170 330 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 GJB3O75712 270 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 UBBP0CG47 229 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
RUNX3-203ENST00000399916 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 SHC1P29353 583 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 RAB5CP51148 216 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 OR12D2P58182 307 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 ZNF177Q13360 481 aaPredicted RBP13□□□□□ -0.33
RUNX3-203ENST00000399916 TMPRSS11BQ86T26 416 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 RIOK2Q9BVS4 552 aaKnown RBP13□□□□□ -0.33
RUNX3-203ENST00000399916 NMUR1Q9HB89 426 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 ZNF629Q9UEG4 869 aaPredicted RBP13□□□□□ -0.33
RUNX3-203ENST00000399916 ELF5Q9UKW6 265 aaPredicted RBP13□□□□□ -0.33
RUNX3-203ENST00000399916 WASF3Q9UPY6 502 aa13□□□□□ -0.33
RUNX3-203ENST00000399916 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 FZD7O75084 574 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 FBXO24O75426 580 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 C6orf47O95873 294 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ADH1AP07327 375 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 DUSP4Q13115 394 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ZNF124Q15973 351 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ATRAIDQ6UW56 229 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ARRDC4Q8NCT1 418 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 PROKR2Q8NFJ6 384 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 PAPOLGQ9BWT3 736 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 MAP1BP46821 2468 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 BTBD17A6NE02 478 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CBY3A6NI87 242 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RBBP9O75884 186 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 INHAP05111 366 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 NR0B1P51843 470 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RHEBQ15382 184 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 KIAA0319Q5VV43 1072 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 TRAPPC5Q8IUR0 188 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RNF175Q8N4F7 328 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CLDN22Q8N7P3 220 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 OR5D16Q8NGK9 328 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 TMEM40Q8WWA1 233 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 UBXN10Q96LJ8 280 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 OPALINQ96PE5 141 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 DERL2Q9GZP9 239 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ZFP57Q9NU63 452 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 POMT2Q9UKY4 750 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 DYRK1BQ9Y463 629 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 LINC01387J3KSC0 135 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 UPK1AO00322 258 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 GABRPO00591 440 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RHOCP08134 193 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 PSMB1P20618 241 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CLDN12P56749 244 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ARF3P61204 181 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 SEC61A1P61619 476 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RNF4P78317 190 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 SCAPQ12770 1279 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 MLLT11Q13015 90 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 TCEAL6Q6IPX3 200 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 UNC5DQ6UXZ4 953 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CEACAM20Q6UY09 585 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 YIPF5Q969M3 257 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 RBP7Q96R05 134 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ABCC13Q9NSE7 274 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 TMEM30AQ9NV96 361 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 A0A0G2JN53 185 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 GABRDO14764 452 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 LAMP1P11279 417 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 TACR1P25103 407 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 GDNFP39905 211 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CDKN1CP49918 316 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 STC1P52823 247 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 PIN1Q13526 163 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
RUNX3-203ENST00000399916 ARHGAP12Q8IWW6 846 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 DNAAF1Q8NEP3 725 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 OR6K6Q8NGW6 343 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 OR52N1Q8NH53 320 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 PAAF1Q9BRP4 392 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 CACNA1DQ01668 2161 aa12.99□□□□□ -0.33
RUNX3-203ENST00000399916 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 ANKRD61A6NGH8 418 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 IRAK2O43187 625 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 PDYNP01213 254 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 GCGRP47871 477 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
RUNX3-203ENST00000399916 DGCR2P98153 550 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 TMEM71Q6P5X7 295 aa12.98□□□□□ -0.33
RUNX3-203ENST00000399916 OR2A12Q8NGT7 310 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms