RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 TNIP2Q8NFZ5 429 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 OR5P2Q8WZ92 322 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 CCDC124Q96CT7 223 aaKnown RBP16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 BTBD9Q96Q07 612 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 INPP5KQ9BT40 448 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 TSPAN10Q9H1Z9 355 aaPredicted RBP16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 FOLH1BQ9HBA9 442 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 NEUROD4Q9HD90 331 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 NPIPA1Q9UND3 350 aa16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 CHCHD2Q9Y6H1 151 aaPredicted RBP16.06■□□□□ 0.16
SMIM11A-202ENST00000399295 PINLYPA6NC86 204 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 PRORSD1PA6NEY8 169 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 TFECO14948 347 aaPredicted RBP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 TO15178 435 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 PPM1BO75688 479 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 IFI6P09912 130 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 CT45A8P0DMV1 189 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 CT45A9P0DMV2 189 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 EFNA1P20827 205 aaPredicted RBP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 PIGAP37287 484 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 DNASE1L1P49184 302 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 PLGLB1Q02325 96 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 PLCXD2Q0VAA5 305 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 ZNF155Q12901 538 aaPredicted RBP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 KPNB1Q14974 876 aaKnown RBP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 CT45A2Q5DJT8 189 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 PRAMEF20Q5VT98 475 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 ZNF621Q6ZSS3 439 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 CLECL1Q8IZS7 167 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 OR4A15Q8NGL6 344 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 DIO2Q92813 273 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 OMA1Q96E52 524 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 GPR137Q96N19 417 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 ECSITQ9BQ95 431 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 CPPED1Q9BRF8 314 aaPredicted RBP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 THUMPD3Q9BV44 507 aaKnown RBP16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 ALG2Q9H553 416 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 SLC25A37Q9NYZ2 338 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 FLNCQ14315 2725 aa16.05■□□□□ 0.16
SMIM11A-202ENST00000399295 ASNA1O43681 348 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 HS6ST1O60243 411 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 ABCB1P08183 1280 aaPredicted RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 HTR1EP28566 365 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 CDKN2CP42773 168 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 CDK9P50750 372 aaKnown RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 PSPHP78330 225 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 LIPEQ05469 1076 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 FLOT2Q14254 428 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 RABL3Q5HYI8 236 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 DNAJC14Q6Y2X3 702 aaPredicted RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 NUP54Q7Z3B4 507 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 SLC44A2Q8IWA5 706 aaPredicted RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 MSRB3Q8IXL7 192 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 SLC34A3Q8N130 599 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 RNF148Q8N7C7 305 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 WDR60Q8WVS4 1066 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 STMN2Q93045 179 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 SECISBP2Q96T21 854 aaKnown RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 KCTD14Q9BQ13 255 aaPredicted RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 TRIM15Q9C019 465 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 RAD21L1Q9H4I0 556 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 CNOT11Q9UKZ1 510 aaKnown RBP16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 OSGIN2Q9Y236 505 aa16.04■□□□□ 0.16
SMIM11A-202ENST00000399295 ANKRD33BA6NCL7 494 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 ACOT7O00154 380 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 CLIC1O00299 241 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 PSMG1O95456 288 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 C6orf47O95873 294 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 GSNP06396 782 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 GSK3BP49841 420 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 MTPNP58546 118 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 PPIAP62937 165 aaKnown RBP16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 FOXO1Q12778 655 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 TBCELQ5QJ74 424 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 NPSR1Q6W5P4 371 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 SLC22A16Q86VW1 577 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 SPPL2AQ8TCT8 520 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 TMBIM1Q969X1 311 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 SPATA9Q9BWV2 254 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 TTTY12Q9BZ98 90 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 C3orf14Q9HBI5 128 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 TUBA8Q9NY65 449 aaPredicted RBP16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 OR10H1Q9Y4A9 318 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 LRRK2Q5S007 2527 aa16.03■□□□□ 0.16
SMIM11A-202ENST00000399295 DOPEY2Q9Y3R5 2298 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 ACOT8O14734 319 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 FKBP6O75344 327 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 REM1O75628 298 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 GLSO94925 669 aaPredicted RBP16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 KRT75O95678 551 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 TCN1P20061 433 aaPredicted RBP16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 UQCRC2P22695 453 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 KRT20P35900 424 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 PRKAG1P54619 331 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 HBA1P69905 142 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 PSG6Q00889 435 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 RBPJQ06330 500 aa16.02■□□□□ 0.16
SMIM11A-202ENST00000399295 ZNHIT3Q15649 155 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms