RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ZAR1Q86SH2 424 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 YRDCQ86U90 279 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PLCZ1Q86YW0 608 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FAM83FQ8NEG4 500 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C7orf26Q96N11 449 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NEUROD4Q9HD90 331 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 INTS9Q9NV88 658 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GPATCH2Q9NW75 528 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ALKBH4Q9NXW9 302 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GPR45Q9Y5Y3 372 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 USH1CQ9Y6N9 552 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 E9PBE3 544 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RNASET2O00584 256 aaKnown RBP12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 BCKDKO14874 412 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CBR3O75828 277 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KCNK2O95069 426 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 UTS2O95399 124 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ALOX5P09917 674 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DGKQP52824 942 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 STX5Q13190 355 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CCNJQ5T5M9 372 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MTFR2Q6P444 385 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ZCCHC12Q6PEW1 402 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 APOOLQ6UXV4 268 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MARCH3Q86UD3 253 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 COX18Q8N8Q8 333 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR56A1Q8NGH5 318 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR4C3Q8NH37 302 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CDS1Q92903 461 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SARAFQ96BY9 339 aa12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TP63Q9H3D4 680 aaPredicted RBP12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MRTO4Q9UKD2 239 aaKnown RBP12.83□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CRYBG3Q68DQ2 2970 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 MED12Q93074 2177 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PRSS51A0A1B0GVH4 220 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CYSRT1A8MQ03 144 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 TCEA1P23193 301 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PRIM2P49643 509 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CASP9P55211 416 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 RPS26P62854 115 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 GRAMD1BQ3KR37 738 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 WLSQ5T9L3 541 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 RTL6Q6ICC9 239 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CDC73Q6P1J9 531 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 EPGNQ6UW88 154 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 OR5D16Q8NGK9 328 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 OR4A15Q8NGL6 344 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 FAM110BQ8TC76 370 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SFXN5Q8TD22 340 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ACTRT2Q8TDY3 377 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 DUSP19Q8WTR2 217 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 TIMP4Q99727 224 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ACTRT3Q9BYD9 372 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PIGUQ9H490 435 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 DUSP22Q9NRW4 184 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 FAM120CQ9NX05 1096 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PPP4R1LQ9P1A2 415 aa12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 FAF1Q9UNN5 650 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ADGRG4Q8IZF6 3080 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 C1QCP02747 245 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ACVR2AP27037 513 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 S100A3P33764 101 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 POU6F2P78424 691 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CRYZQ08257 329 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PMPCAQ10713 525 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 DPY19L1Q2PZI1 675 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 DCST1Q5T197 706 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ANXA8L1Q5VT79 327 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 RPTNQ6XPR3 784 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 C6orf120Q7Z4R8 191 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ZNF808Q8N4W9 903 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 OR14L1PQ8NHC6 308 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ADAMTS15Q8TE58 950 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CKAP2Q8WWK9 683 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 STACQ99469 402 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 EBF4Q9BQW3 602 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 BTBD2Q9BX70 525 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 DSN1Q9H410 356 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SERHL2Q9H4I8 314 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 MED11Q9P086 117 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ABCG2Q9UNQ0 655 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 FAM215AQ9Y5M1 114 aa12.82□□□□□ -0.36
HLA-DQB1-202ENST00000399079 NCOA6Q14686 2063 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 FIGNL2A6NMB9 653 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 UBDO15205 165 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 GMFGO60234 142 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PGRP06401 933 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 IDO1P14902 403 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 BMP7P18075 431 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SMSP52788 366 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 VASNQ6EMK4 673 aa12.81□□□□□ -0.36
HLA-DQB1-202ENST00000399079 EID3Q8N140 333 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms