RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 NDUFAF4Q9P032 175 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 GABRR3A8MPY1 467 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 M0R082 166 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 PRODHO43272 600 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 STXBP1P61764 594 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 OC90Q02509 493 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ILF3Q12906 894 aaKnown RBP eCLIP13.78□□□□□ -0.23e-7■■■■■ 32.4
RPRD1A-202ENST00000399022 GK2Q14410 553 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 LYPD8Q6UX82 237 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ERN2Q76MJ5 926 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 C6orf120Q7Z4R8 191 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CCDC116Q8IYX3 515 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 OR2T33Q8NG76 320 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 NEIL2Q969S2 332 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 MCHR1Q99705 422 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 NTMT1Q9BV86 223 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CLEC4EQ9ULY5 219 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CCL26Q9Y258 94 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 TMEM5Q9Y2B1 443 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 MN1Q10571 1320 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF821O75541 412 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF3P17036 446 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 MPIP34949 423 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ODF4Q2M2E3 257 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 LYPD4Q6UWN0 246 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 BEST3Q8N1M1 668 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF454Q8N9F8 522 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 SPRYD4Q8WW59 207 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 OR2S2Q9NQN1 319 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 GPR4P46093 362 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 BTN3A2P78410 334 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 E2F1Q01094 437 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 TAP2Q03519 686 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 METAP1DQ6UB28 335 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 KCTD9Q7L273 389 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 FOXRED2Q8IWF2 684 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 POMGNT2Q8NAT1 580 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 HSPA12BQ96MM6 686 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 KXD1Q9BQD3 176 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC23A1Q9UHI7 598 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ERVK-19Q9WJR5 959 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 POLR1DQ9Y2S0 133 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 A0A1W2PP55 124 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ASPDHA6ND91 283 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 IGLON5A6NGN9 336 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 SCO2O43819 266 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 PRH1P02810 166 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 RAF1P04049 648 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ARHGDIBP52566 201 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ID2Q02363 134 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 GPR50Q13585 617 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 PLK5Q496M5 336 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC25A24Q6NUK1 477 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 GALNTL5Q7Z4T8 443 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 TP53I13Q8NBR0 393 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 TM9SF4Q92544 642 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CPNE2Q96FN4 548 aaPredicted RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 LGR4Q9BXB1 951 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CNIH4Q9P003 139 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CKLFQ9UBR5 152 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 BTNL2Q9UIR0 455 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 FARSAQ9Y285 508 aaKnown RBP13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 PADI2Q9Y2J8 665 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 CSNK1G3Q9Y6M4 447 aa13.78□□□□□ -0.2
RPRD1A-202ENST00000399022 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 RCBTB2O95199 551 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 GTF2F2P13984 249 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 NPR2P20594 1047 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 ADH7P40394 386 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 GIPRP48546 466 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF155Q12901 538 aaPredicted RBP13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 ELOA3BQ3SY89 546 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 TCTE1Q5JU00 501 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 AFMIDQ63HM1 303 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 LIMS2Q7Z4I7 341 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 LRRC28Q86X40 367 aaPredicted RBP13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 ELOA3Q8NG57 546 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 HAVCR1Q96D42 359 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 PKMYT1Q99640 499 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 SORBS1Q9BX66 1292 aaKnown RBP13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 HRH3Q9Y5N1 445 aa13.77□□□□□ -0.2
RPRD1A-202ENST00000399022 CEP290O15078 2479 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 WASH3PC4AMC7 463 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 B3GALNT1O75752 331 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 TCRBP04435 133 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 CTGFP29279 349 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 CD6P30203 668 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 AIMP2Q13155 320 aaKnown RBP13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 MPP7Q5T2T1 576 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 PLBD1Q6P4A8 553 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 HTR3DQ70Z44 454 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 SERPINA12Q8IW75 414 aa13.77□□□□□ -0.21
RPRD1A-202ENST00000399022 OR4F15Q8NGB8 312 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms