RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 NKAIN2Q5VXU1 208 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 HS3ST5Q8IZT8 346 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 MCTS1Q9ULC4 181 aaKnown RBP13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 A0A0A6YYH2 397 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 A6NJ64 397 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 RAD1O60671 282 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 LDB3O75112 727 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 YES1P07947 543 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 TLE3Q04726 772 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 GALNT1Q10472 559 aaPredicted RBP13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 RPL13AP3Q6NVV1 102 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF367Q7RTV3 350 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 BCL7CQ8WUZ0 217 aaPredicted RBP13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 LRR1Q96L50 414 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SEC14L4Q9UDX3 406 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF175Q9Y473 711 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 MYH11P35749 1972 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 NDUFV2P19404 249 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 FDXRP22570 491 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC2A5P22732 501 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 PLBD1Q6P4A8 553 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 HS6ST2Q96MM7 605 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 NFS1Q9Y697 457 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 A0A1B0GV50 99 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 FBP2O00757 339 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC16A8O95907 504 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 THBS2P35442 1172 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SOX3P41225 446 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 LSSP48449 732 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 NADSYN1Q6IA69 706 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SNIP1Q8TAD8 396 aaKnown RBP13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 KLHL15Q96M94 604 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC6A18Q96N87 628 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 DKK3Q9UBP4 350 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 KLHL21Q9UJP4 597 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 A0A1W2PPW3 197 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 HOXC11O43248 304 aaPredicted RBP13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 HSD3B1P14060 373 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 AKR1C4P17516 323 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 CTXN1P60606 82 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTC1P68032 377 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTA1P68133 377 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 OR51L1Q8NGJ5 315 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 CPT1CQ8TCG5 803 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 ADAMTS19Q8TE59 1207 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 APIPQ96GX9 242 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 TMEM19Q96HH6 336 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 LTB4R2Q9NPC1 389 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 OR2S2Q9NQN1 319 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 MBTPS2O43462 519 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 FOXD2O60548 495 aaPredicted RBP13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 CPOXP36551 454 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 XCR1P46094 333 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 AWAT2Q6E213 333 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 OR52E1Q8NGJ3 308 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 OR9A2Q8NGT5 310 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 TSPEARQ8WU66 669 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 THRSPQ92748 146 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 GCDHQ92947 438 aaPredicted RBP13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 ECHDC3Q96DC8 303 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 CDC6Q99741 560 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 HHATLQ9HCP6 504 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
PCDHA11-201ENST00000398640 SCGB2A1O75556 95 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 PPP1R3DO95685 299 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 IFNA2P01563 188 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SMAD2Q15796 467 aaKnown RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 FAM217AQ8IXS0 508 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 PAPOLGQ9BWT3 736 aaKnown RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 HDAC8Q9BY41 377 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 ARRDC1-AS1Q9H2J1 176 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 RDH14Q9HBH5 336 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 AIG1Q9NVV5 245 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 B3GALT1Q9Y5Z6 326 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 RHCEP18577 417 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 MTFR2Q6P444 385 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 MAMDC2Q7Z304 686 aaPredicted RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 IQCF1Q8N6M8 205 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 AGBL5Q8NDL9 886 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 OR52N2Q8NGI0 321 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC41A3Q96GZ6 507 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 METTL2AQ96IZ6 378 aaKnown RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 CTRCQ99895 268 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 HDHD5Q9BXW7 423 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTR6Q9GZN1 396 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 COPZ2Q9P299 210 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 STSP08842 583 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 KDELR2P33947 212 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 PTGER1P34995 402 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 OR5M10Q6IEU7 315 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 ARHGAP11AQ6P4F7 1023 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 CDHR3Q6ZTQ4 885 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 MEX3DQ86XN8 651 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms