RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 KDM4BO94953 1096 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 TFAP2AP05549 437 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 PGAM2P15259 253 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 MAP2K3P46734 347 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 NR0B1P51843 470 aaKnown RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ARHGDIBP52566 201 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ARF3P61204 181 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ANKRD54Q6NXT1 300 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 PODNL1Q6PEZ8 512 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 LRRN1Q6UXK5 716 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 FAM83HQ6ZRV2 1179 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 SHFQ7M4L6 423 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 P4HA3Q7Z4N8 544 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 MRPL38Q96DV4 380 aaKnown RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ERVK-19Q9WJR5 959 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF195O14628 629 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF208O43345 1280 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 FARS2O95363 451 aaKnown RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 CDK1P06493 297 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 STOMP27105 288 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 SLC6A8P48029 635 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 MAP4K2Q12851 820 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ADAMTS16Q8TE57 1224 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 C14orf119Q9NWQ9 140 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 FTSJ1Q9UET6 329 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 H3BNC9 293 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 PHYHO14832 338 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 PCDH17O14917 1159 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 LRRTM2O43300 516 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 PPP1R3DO95685 299 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 CXCL12P48061 93 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 KIAA0895LQ68EN5 471 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 LEG1Q6P5S2 330 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 Q6ZNB5 142 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 STARD5Q9NSY2 213 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 MEMO1Q9Y316 297 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 A0A1W2PPK0 400 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR14I1A6ND48 311 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SCGB2B2Q4G0G5 96 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 PRAMEF17Q5VTA0 474 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 DNAJA3Q96EY1 480 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM41AQ96HV5 264 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SAP130Q9H0E3 1048 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SLC35A3Q9Y2D2 325 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 CSNK1G3Q9Y6M4 447 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 FAM155AB1AL88 458 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 NPIPA2E9PIF3 369 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 NPIPA3F8WFD2 350 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 FZD6O60353 706 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 RBM34P42696 430 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 EMX1Q04741 257 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 ADIPOR2Q86V24 386 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SLC38A5Q8WUX1 472 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 BLACEA4D250 179 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 HTR3EA5X5Y0 456 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 C5orf51A6NDU8 294 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 RLN2P04090 185 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 MYOGP15173 224 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 FUT1P19526 365 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 RIDAP52758 137 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 RAB40BQ12829 278 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 HSF5Q4G112 596 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SYCE2Q6PIF2 218 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMPRSS12Q86WS5 348 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 CYB561A3Q8NBI2 242 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF784Q8NCA9 323 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR52R1Q8NGF1 315 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 SETD6Q8TBK2 473 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 CCDC32Q9BV29 185 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 BTBD2Q9BX70 525 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF717Q9BY31 904 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 TEX10Q9NXF1 929 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 DHDHQ9UQ10 334 aa13.38□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF878C9JN71 531 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 KLK8O60259 260 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 GKN3PP0CG01 181 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 FOSL2P15408 326 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 GIPRP48546 466 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF84P51523 738 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 CCINQ13939 588 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 TBCEQ15813 527 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 SLC15A4Q8N697 577 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 FCAMRQ8WWV6 532 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 DIO2Q92813 273 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 KCMF1Q9P0J7 381 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 CEPT1Q9Y6K0 416 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 NPIPA5A0A0B4J1W7 369 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 NPIPA7E9PJI5 369 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 GSTT2P0CG29 244 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 NPIPA8P0DM63 369 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 CTHP32929 405 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms