RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PRAMEF11O60813 436 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 ITGA10O75578 1167 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 PRKAR1BP31321 381 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 GIPRP48546 466 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 SMIM11AP58511 58 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 SERTAD2Q14140 314 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 JAZF1Q86VZ6 243 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 CIR1Q86X95 450 aaPredicted RBP14.13□□□□□ -0.15
CYLD-202ENST00000398568 CMIPQ8IY22 773 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 FAM71CQ8NEG0 241 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 SKA2Q8WVK7 121 aaPredicted RBP14.13□□□□□ -0.15
CYLD-202ENST00000398568 FAIM2Q9BWQ8 316 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 CACNG4Q9UBN1 327 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 GULP1Q9UBP9 304 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 TRIOBPQ9H2D6 2365 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 CARNS1A5YM72 827 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 UBL3O95164 117 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 WNT1P04628 370 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 CBSLP0DN79 551 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 SPP1P10451 314 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 ELAVL4P26378 380 aaKnown RBP14.13□□□□□ -0.15
CYLD-202ENST00000398568 CBSP35520 551 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 UBXN2BQ14CS0 331 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 ZNF791Q3KP31 576 aaPredicted RBP14.13□□□□□ -0.15
CYLD-202ENST00000398568 ZNF852Q6ZMS4 543 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 KLHL1Q9NR64 748 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 PIPOXQ9P0Z9 390 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 EPHA6Q9UF33 1036 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 MYO9BQ13459 2157 aa14.13□□□□□ -0.15
CYLD-202ENST00000398568 CREBL2O60519 120 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 HIST1H2ABP04908 130 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 PSMB1P20618 241 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 DYRK1AQ13627 763 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 SF1Q15637 639 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 GGTA1PQ4G0N0 100 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MS4A13Q5J8X5 152 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 PGBD2Q6P3X8 592 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 CERS6Q6ZMG9 384 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 HIST3H2AQ7L7L0 130 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 HDDC3Q8N4P3 179 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 GLYATL2Q8WU03 294 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 HIST1H2ACQ93077 130 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 SPON2Q9BUD6 331 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 A0A1B0GUH1 482 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 GNG14A0A1W2PPG7 69 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MTMR11A4FU01 709 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 ARPC1BO15143 372 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 SH3BGRLO75368 114 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 CDC123O75794 336 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 ANXA4P09525 319 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 IGFBP6P24592 240 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 SOAT1P35610 550 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 NR0B1P51843 470 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 YBEYP58557 167 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 SLC5A12Q1EHB4 618 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MINDY4Q4G0A6 757 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 SLC25A30Q5SVS4 291 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 ACSM5Q6NUN0 579 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 PGAP1Q75T13 922 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 LRRC70Q7Z2Q7 622 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 KLBQ86Z14 1044 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 GNPDA2Q8TDQ7 276 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MRPS31Q92665 395 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 MRPL48Q96GC5 212 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 DMRTA2Q96SC8 542 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MRPL15Q9P015 296 aaKnown RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 STAT5AP42229 794 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MMP15P51511 669 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 LIM2P55344 173 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 FAM69AQ5T7M9 428 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 ARMC12Q5T9G4 340 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 CDC73Q6P1J9 531 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 MTFR2Q6P444 385 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 SFXN4Q6P4A7 337 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 OR6V1Q8N148 313 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 SPRYD4Q8WW59 207 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 BTBD1Q9H0C5 482 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 RDH14Q9HBH5 336 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 NPDC1Q9NQX5 325 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 ZNF275Q9NSD4 429 aaPredicted RBP14.12□□□□□ -0.15
CYLD-202ENST00000398568 C14orf105Q9NVL8 296 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 KCND3Q9UK17 655 aa14.12□□□□□ -0.15
CYLD-202ENST00000398568 ST8SIA5O15466 376 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 AQP8O94778 261 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 ANKRD34CP0C6C1 535 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 IFNGR1P15260 489 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 CST5P28325 142 aaPredicted RBP14.11□□□□□ -0.15
CYLD-202ENST00000398568 MBTPS1Q14703 1052 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 FAM74A1Q5RGS3 127 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 STX12Q86Y82 276 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 CLDN19Q8N6F1 224 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 TMEM185AQ8NFB2 350 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 GINS4Q9BRT9 223 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 OR51M1Q9H341 326 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 TMEM38AQ9H6F2 299 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 MRPS18AQ9NVS2 196 aaKnown RBP14.11□□□□□ -0.15
CYLD-202ENST00000398568 MIOXQ9UGB7 285 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 GPR52Q9Y2T5 361 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 HMSDA8MTL9 139 aa14.11□□□□□ -0.15
CYLD-202ENST00000398568 GPR31O00270 319 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms