RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SLBPQ14493 270 aaKnown RBP eCLIP2.58□□□□□ -2
CHD9-202ENST00000398510 RNPS1Q15287 305 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SLC5A12Q1EHB4 618 aa2.58□□□□□ -2
CHD9-202ENST00000398510 UMODL1-AS1Q8N2C9 162 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C12orf45Q8N5I9 185 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 OR2A12Q8NGT7 310 aa2.58□□□□□ -2
CHD9-202ENST00000398510 LILRB4Q8NHJ6 448 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ACER1Q8TDN7 264 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PDLIM2Q96JY6 352 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CCDC115Q96NT0 180 aa2.58□□□□□ -2
CHD9-202ENST00000398510 DCLRE1CQ96SD1 692 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 MECRQ9BV79 373 aa2.58□□□□□ -2
CHD9-202ENST00000398510 XKR8Q9H6D3 395 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SOX17Q9H6I2 414 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ISYNA1Q9NPH2 558 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AIG1Q9NVV5 245 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PLK2Q9NYY3 685 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CACNA1BQ00975 2339 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ACACAQ13085 2346 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TET1Q8NFU7 2136 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NUP210LQ5VU65 1888 aa2.58□□□□□ -2
CHD9-202ENST00000398510 INTS1Q8N201 2190 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 TMEM8BA6NDV4 472 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PRSS44E7EML9 344 aa2.58□□□□□ -2
CHD9-202ENST00000398510 H0YAE9 185 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RNASET2O00584 256 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 DLGAP1O14490 977 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CBX6O95503 412 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PMS2P3Q13401 168 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ARFRP1Q13795 201 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GRB7Q14451 532 aa2.58□□□□□ -2
CHD9-202ENST00000398510 LASP1Q14847 261 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SHHQ15465 462 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TAZQ16635 292 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZBED5Q49AG3 693 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AGTRAPQ6RW13 159 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ADAMTSL4Q6UY14 1074 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TIPARPQ7Z3E1 657 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 RTN4RL1Q86UN2 441 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SERPINA12Q8IW75 414 aa2.58□□□□□ -2
CHD9-202ENST00000398510 IQCF2Q8IXL9 164 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RNF113BQ8IZP6 322 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 MUC15Q8N387 334 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR1J4Q8NGS1 313 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TCP10LQ8TDR4 215 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PIGKQ92643 395 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C12orf43Q96C57 262 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SNX18Q96RF0 628 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PFDN5Q99471 154 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SORBS1Q9BX66 1292 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 PKIGQ9Y2B9 76 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR1A2Q9Y585 309 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AGAP5A6NIR3 686 aa2.58□□□□□ -2
CHD9-202ENST00000398510 J3QRK9 145 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GHRHP01286 108 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SRFP11831 508 aa2.58□□□□□ -2
CHD9-202ENST00000398510 DEFA4P12838 97 aa2.58□□□□□ -2
CHD9-202ENST00000398510 DRD5P21918 477 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MAGEA3P43357 314 aa2.58□□□□□ -2
CHD9-202ENST00000398510 VEGFCP49767 419 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ADPRHP54922 357 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ANTXR2P58335 489 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TAS2R30P59541 319 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SSTP61278 116 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RPS14P62263 151 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 TLE2Q04725 743 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RIN1Q13671 783 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TBCEQ15813 527 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 OR7E24Q6IFN5 339 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TMEM207Q6UWW9 146 aa2.58□□□□□ -2
CHD9-202ENST00000398510 USP53Q70EK8 1073 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C17orf53Q8N3J3 647 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 IQCF1Q8N6M8 205 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF433Q8N7K0 673 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ARL14EPQ8N8R7 260 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 CDRT4Q8N9R6 151 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR52K2Q8NGK3 314 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR5D16Q8NGK9 328 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF417Q8TAU3 575 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TRIM43Q96BQ3 446 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SARAFQ96BY9 339 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FBXL8Q96CD0 374 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TCEAL4Q96EI5 215 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TRMT61AQ96FX7 289 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 LOXL4Q96JB6 756 aa2.58□□□□□ -2
CHD9-202ENST00000398510 APOLD1Q96LR9 279 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TREX2Q9BQ50 279 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 UQCC2Q9BRT2 126 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CRB3Q9BUF7 120 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MS4A5Q9H3V2 200 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PTPRHQ9HD43 1115 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GPATCH2LQ9NWQ4 482 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TAC3Q9UHF0 121 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GNG8Q9UK08 70 aa2.58□□□□□ -2
CHD9-202ENST00000398510 YARS2Q9Y2Z4 477 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF337Q9Y3M9 751 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TIMM13Q9Y5L4 95 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 FAM240BA0A1B0GVZ2 78 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C2orf71A6NGG8 1288 aa2.58□□□□□ -2
CHD9-202ENST00000398510 A6NHS1 94 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms