RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TYRP14679 529 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 NNMTP40261 264 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 MAPK9P45984 424 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 POLR2GP62487 172 aaKnown RBP eCLIP15□□□□□ -0.01
CHMP1A-201ENST00000397901 CNTN1Q12860 1018 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 ADAM15Q13444 863 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 CAMK2DQ13557 499 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 CAMK1Q14012 370 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 PRAMEF14Q5SWL7 426 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 PRAMEF13Q5VWM6 474 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 DPPA4Q7L190 304 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 KIAA0907Q7Z7F0 614 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 FAM26EQ8N5C1 309 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 VN1R2Q8NFZ6 395 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 COQ10AQ96MF6 247 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 OR2M2Q96R28 347 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 TREX2Q9BQ50 279 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 C1QTNF6Q9BXI9 259 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 POLDIP3Q9BY77 421 aaKnown RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 LINC00597Q9H2U6 94 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 OR51J1Q9H342 316 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 KCNK12Q9HB15 430 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 PRAMEF27A3QJZ7 478 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 MMP20O60882 483 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 ADAM11O75078 769 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 PTGER1P34995 402 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 CD79BP40259 229 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 WNT4P56705 351 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 ZNF658BQ4V348 819 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 C3orf38Q5JPI3 329 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 CLRN3Q8NCR9 226 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 OR4K5Q8NGD3 323 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 XAGE5Q8WWM1 108 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 TRIM43Q96BQ3 446 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 TM4SF18Q96CE8 201 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 ERMAPQ96PL5 475 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 ZNF607Q96SK3 696 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 NPAS1Q99742 590 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 FNDC11Q9BVV2 318 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 HDHD2Q9H0R4 259 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 POLMQ9NP87 494 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 SLC35C2Q9NQQ7 365 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 SIRT3Q9NTG7 399 aaPredicted RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 TESQ9UGI8 421 aaKnown RBP15□□□□□ -0.01
CHMP1A-201ENST00000397901 IL36AQ9UHA7 158 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 GSTK1Q9Y2Q3 226 aa15□□□□□ -0.01
CHMP1A-201ENST00000397901 PRSS44E7EML9 344 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 H0YC42 278 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 RFXAPO00287 272 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 EFCAB14O75071 495 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 TBX6O95947 436 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 ACRP10323 421 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 NR2F6P10588 404 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 MMP12P39900 470 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 GIPRP48546 466 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 GPR68Q15743 365 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 PLK5Q496M5 336 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 FBXO15Q8NCQ5 510 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 SMPDL3AQ92484 453 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 ATOH1Q92858 354 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 RNFT2Q96EX2 444 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 C12orf57Q99622 126 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 FUZQ9BT04 418 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 PLA2G12AQ9BZM1 189 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 TRPC4Q9UBN4 977 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 FBXW2Q9UKT8 454 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 PRKAB1Q9Y478 270 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 A8MXK9 166 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 STK25O00506 426 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 C8AP07357 584 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 CXCL3P19876 107 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 CCR2P41597 374 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 METAP1P53582 386 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 COL19A1Q14993 1142 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 ZNF805Q5CZA5 627 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 NHLRC3Q5JS37 347 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 MZT2AQ6P582 158 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 ZNF436Q9C0F3 470 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 EGLN3Q9H6Z9 239 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 HCFC1R1Q9NWW0 138 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 HCN3Q9P1Z3 774 aa14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 NFKBIL1Q9UBC1 381 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-201ENST00000397901 A0A0G2JN53 185 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 CXorf51AA0A1B0GTR3 108 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 ABCD4O14678 606 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 SOX18P35713 384 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 SMIM11AP58511 58 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 FABP5Q01469 135 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 RASSF6Q6ZTQ3 369 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 PARS2Q7L3T8 475 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 OR8K3Q8NH51 312 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 UBE2E3Q969T4 207 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 AHSPQ9NZD4 102 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 SCP2D1Q9UJQ7 156 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 ACAD8Q9UKU7 415 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 ASF1AQ9Y294 204 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 MEIKINA0A087WXM9 373 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 FEZF1A0PJY2 475 aa14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 KPNA3O00505 521 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-201ENST00000397901 CASKO14936 926 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms