RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PIK3CGP48736 1102 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 MAPK12P53778 367 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 GTF2H2Q13888 395 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 SFRP5Q5T4F7 317 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 LIPNQ5VXI9 398 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 C11orf71Q6IPW1 123 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 MFSD12Q6NUT3 480 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 GTF2H2CQ6P1K8 395 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-202ENST00000396629 CTAGE4Q8IX94 777 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 SPC24Q8NBT2 197 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 OR4N2Q8NGD1 307 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 OR10D3Q8NH80 312 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 PROX1Q92786 737 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 KLHL29Q96CT2 875 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 CPNE1Q99829 537 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 USB1Q9BQ65 265 aaKnown RBP7.51□□□□□ -1.21
SCFD1-202ENST00000396629 MRPL1Q9BYD6 325 aaKnown RBP7.51□□□□□ -1.21
SCFD1-202ENST00000396629 IPPKQ9H8X2 491 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 ANKRA2Q9H9E1 313 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 FOLH1BQ9HBA9 442 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 FAIMQ9NVQ4 179 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 FBXO34Q9NWN3 711 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 XPR1Q9UBH6 696 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 STOML1Q9UBI4 398 aa7.51□□□□□ -1.21
SCFD1-202ENST00000396629 MCTS1Q9ULC4 181 aaKnown RBP7.51□□□□□ -1.21
SCFD1-202ENST00000396629 IGLV3-32A0A0A0MS00 114 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 UBFD1O14562 309 aaKnown RBP7.5□□□□□ -1.21
SCFD1-202ENST00000396629 EIF1AYO14602 144 aaKnown RBP7.5□□□□□ -1.21
SCFD1-202ENST00000396629 TP73O15350 636 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 CLDN9O95484 217 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 TUBBP07437 444 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 LTA4HP09960 611 aaKnown RBP7.5□□□□□ -1.21
SCFD1-202ENST00000396629 PDIA2Q13087 525 aaKnown RBP7.5□□□□□ -1.21
SCFD1-202ENST00000396629 TSC22D1Q15714 1073 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 UBAP2Q5T6F2 1119 aaKnown RBP7.5□□□□□ -1.21
SCFD1-202ENST00000396629 AGAP6Q5VW22 663 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 GOLGA7Q7Z5G4 137 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 GALNT10Q86SR1 603 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 SLC44A2Q8IWA5 706 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-202ENST00000396629 RHEBL1Q8TAI7 183 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 DUSP19Q8WTR2 217 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 C12orf49Q9H741 205 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 FLRT3Q9NZU0 649 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 JRKLQ9Y4A0 524 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 ZNF780BQ9Y6R6 833 aa7.5□□□□□ -1.21
SCFD1-202ENST00000396629 SYCE1LA8MT33 242 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 SHISA8B8ZZ34 492 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ADAMDEC1O15204 470 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CXCL13O43927 109 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 RAMP1O60894 148 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 SIX3O95343 332 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 SYNGR4O95473 234 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ZNF17P17021 662 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 IL32P24001 234 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GP5P40197 560 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GZMKP49863 264 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ALDH18A1P54886 795 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 C21orf58P58505 322 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 TRA2BP62995 288 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 LSM11P83369 360 aaKnown RBP eCLIP7.49□□□□□ -1.213e-6■□□□□ 10
SCFD1-202ENST00000396629 GALNT1Q10472 559 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ERCC6LQ2NKX8 1250 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FAM120AOSQ5T036 256 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 LGSNQ5TDP6 509 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 PPP4R4Q6NUP7 873 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FAM180BQ6P0A1 224 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 METTL2BQ6P1Q9 378 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 TFAP2EQ6VUC0 442 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 IL17RELQ6ZVW7 336 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 COMMD6Q7Z4G1 85 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 MEX3DQ86XN8 651 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CCDC116Q8IYX3 515 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 C10orf105Q8TEF2 133 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 KAT2AQ92830 837 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 NXNL1Q96CM4 212 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CACNG6Q9BXT2 260 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 POTEKPQ9BYX7 375 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 L2HGDHQ9H9P8 463 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FAM120CQ9NX05 1096 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 KCNS2Q9ULS6 477 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GOLGA8QA0A0J9YX86 632 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CCDC189A1A4V9 331 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 SLC35F4A4IF30 521 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GOLGA8OA6NCC3 632 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GOLGA8NF8WBI6 632 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GOLGA8RI6L899 631 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 OR7A17O14581 309 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 KCNAB3O43448 404 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 PLOD3O60568 738 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CFPP27918 469 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CDH11P55287 796 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 PSG6Q00889 435 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 STX5Q13190 355 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 SQLEQ14534 574 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 PFKFB4Q16877 469 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CYP27C1Q4G0S4 372 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FRG2Q64ET8 278 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FAM166AQ6J272 317 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms