RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MOV10Q9HCE1 1003 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHGA5Q9Y5G8 931 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ARFGEF3Q5TH69 2177 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1W2PRG6 482 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 DAPL1A0PJW8 107 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CPED1A4D0V7 1026 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 OR6C76A6NM76 312 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PPP6CO00743 305 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CHP2O43745 196 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 INMTO95050 263 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PRSS56P0CW18 603 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CD36P16671 472 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 HK1P19367 917 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PPP2R2BQ00005 443 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TSPAN31Q12999 210 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF404Q494X3 552 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TPRG1LQ5T0D9 272 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 BAIAP2L2Q6UXY1 529 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ARMCX6Q7L4S7 300 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MCATQ8IVS2 390 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SIX5Q8N196 739 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF619Q8N2I2 560 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PHOSPHO1Q8TCT1 267 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 EID2BQ96D98 161 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 LGALS12Q96DT0 336 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CPPED1Q9BRF8 314 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NIPAL2Q9H841 368 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ACSS2Q9NR19 701 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PAQR5Q9NXK6 330 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 XIRP2A4UGR9 3374 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF264O43296 627 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KLHL18O94889 574 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TFPIP10646 304 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 POU3F3P20264 500 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CD22P20273 847 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MC3RP41968 323 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ATP12AP54707 1039 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 OR4D2P58180 307 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KLHL12Q53G59 568 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF547Q8IVP9 402 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TSACCQ96A04 125 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 AMDHD1Q96NU7 426 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CHRDQ9H2X0 955 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TAS2R8Q9NYW2 309 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CLEC4EQ9ULY5 219 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PRSS21Q9Y6M0 314 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SLC26A5P58743 744 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MOGQ16653 247 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 COL13A1Q5TAT6 717 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF551Q7Z340 670 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 HS3ST5Q8IZT8 346 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CADM2Q8N3J6 435 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PAK1IP1Q9NWT1 392 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 POM121BA6NF01 834 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SLC1A7O00341 560 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CDC40O60508 579 aaKnown RBP eCLIP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SBK3P0C264 359 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CYP4B1P13584 511 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GABRA3P34903 492 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TRHRP34981 398 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KCNJ10P78508 379 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 DCDP81605 110 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 DUSP8Q13202 625 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KDM4DQ6B0I6 523 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PEG10Q86TG7 708 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CLDN22Q8N7P3 220 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 OR6K6Q8NGW6 343 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GNPDA2Q8TDQ7 276 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 EGLN2Q96KS0 407 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 RAB33BQ9H082 229 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KLRF1Q9NZS2 232 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 C19orf53Q9UNZ5 99 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GIMD1P0DJR0 217 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 S100GP29377 79 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MNDAP41218 407 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GSSP48637 474 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PLCXD2Q0VAA5 305 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NADK2Q4G0N4 442 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NHSL2Q5HYW2 709 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CES4AQ5XG92 561 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 WBP2NLQ6ICG8 309 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FRRS1Q6ZNA5 592 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NAGSQ8N159 534 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 LRR1Q96L50 414 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 DCSTAMPQ9H295 470 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KLHL1Q9NR64 748 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PLCXD1Q9NUJ7 323 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ACTL7AQ9Y615 435 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PLXNA2O75051 1894 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 UGT2B7P16662 529 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ELAVL4P26378 380 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CRABP1P29762 137 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MRPS10P82664 201 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TGFBR3Q03167 851 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SEC23BQ15437 767 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC92Q53HC0 331 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM215Q68D42 235 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SLC6A19Q695T7 634 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ADNP2Q6IQ32 1131 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 IL17FQ96PD4 163 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms