RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OGFRL1Q5TC84 451 aaPredicted RBP18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 C17orf47Q8NEP4 570 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 EME1Q96AY2 570 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 LMF1Q96S06 567 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 TACO1Q9BSH4 297 aaKnown RBP18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 THSD1Q9NS62 852 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 DMXL1Q9Y485 3027 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 WDFY3Q8IZQ1 3526 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 PRAMEF25A6NGN4 478 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 PEX12O00623 359 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 UGT2B17O75795 530 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 DIRAS1O95057 198 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 LGI1O95970 557 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 THBS1P07996 1170 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 RPS4Y1P22090 263 aaKnown RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 BTBD16Q32M84 506 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 AP1ARQ63HQ0 302 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 DHRS4L2Q6PKH6 230 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 KIRREL2Q6UWL6 708 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 CARM1Q86X55 608 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 VANGL1Q8TAA9 524 aaPredicted RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 APOBEC4Q8WW27 367 aaKnown RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 TMBIM1Q969X1 311 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 HSPBAP1Q96EW2 488 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 AMBRA1Q9C0C7 1298 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 SLC9A8Q9Y2E8 581 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 GVINP1Q7Z2Y8 2422 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 LOC101059948A0A1B0GTJ6 334 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 SAC3D1A6NKF1 404 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 SYT5O00445 386 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 SOCS6O14544 535 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 ACOX3O15254 700 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 PSMD4P55036 377 aaKnown RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 EXT1Q16394 746 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 MAPK14Q16539 360 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 LIN52Q52LA3 116 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 OR2T5Q6IEZ7 315 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF836Q6ZNA1 936 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF441Q8N8Z8 693 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 CATSPER1Q8NEC5 780 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 OR11G2Q8NGC1 345 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 OR2T29Q8NH02 315 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 OR8K3Q8NH51 312 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 NUBPLQ8TB37 319 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 TP53INP1Q96A56 240 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 EFHD2Q96C19 240 aaPredicted RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF300Q96RE9 604 aaPredicted RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 FAM117AQ9C073 453 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 KLHL4Q9C0H6 718 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 LIN28AQ9H9Z2 209 aaKnown RBP18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 NTN4Q9HB63 628 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 KLHL28Q9NXS3 571 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 NDUFAF4Q9P032 175 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 KCNE5Q9UJ90 142 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 PCDHGA10Q9Y5H3 936 aa18.86■□□□□ 0.61
VCPKMT-202ENST00000395860 CENPVL1A0A0U1RR11 272 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 TO15178 435 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 PRSS23O95084 383 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 IL33O95760 270 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 EPPINO95925 133 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 F8A1P23610 371 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 DCTP40126 519 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 IQCCQ4KMZ1 466 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 NDUFAF7Q7L592 441 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 PPP1R32Q7Z5V6 425 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 COMTD1Q86VU5 262 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 PRR22Q8IZ63 422 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 IL22RA1Q8N6P7 574 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 OR5L2Q8NGL0 311 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 NKD1Q969G9 470 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF347Q96SE7 839 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 CIB1Q99828 191 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 ASCL3Q9NQ33 180 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 FAM32AQ9Y421 112 aaKnown RBP18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 ENPP4Q9Y6X5 453 aa18.85■□□□□ 0.61
VCPKMT-202ENST00000395860 NSG1A0A0A6YYJ2 146 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 M0R3H8 397 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 TERTO14746 1132 aaKnown RBP18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 ZFAND5O76080 213 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF23P17027 643 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 IL12BP29460 328 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 KRT20P35900 424 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 YAP1P46937 504 aaKnown RBP18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 PSPHP78330 225 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 PLCXD2Q0VAA5 305 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 EIPR1Q53HC9 387 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 IGF2-ASQ6U949 168 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 TSEN54Q7Z6J9 526 aaKnown RBP18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 SLC34A3Q8N130 599 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF614Q8N883 585 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 THAP3Q8WTV1 239 aaPredicted RBP18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 DIO2Q92813 273 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 IMMP1LQ96LU5 166 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 KCND3Q9UK17 655 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 OAZ3Q9UMX2 235 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 CHST2Q9Y4C5 530 aa18.84■□□□□ 0.61
VCPKMT-202ENST00000395860 A0A1W2PQ72 361 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 DCDC2BA2VCK2 349 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms