RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ELOAQ14241 798 aaKnown RBP18.2■□□□□ 0.5
SNCA-203ENST00000394986 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNCA-203ENST00000394986 HYAL4Q2M3T9 481 aa18.2■□□□□ 0.5
SNCA-203ENST00000394986 DCST2Q5T1A1 773 aa18.2■□□□□ 0.5
SNCA-203ENST00000394986 FAM109AQ8N4B1 249 aa18.2■□□□□ 0.5
SNCA-203ENST00000394986 RAB8BQ92930 207 aa18.2■□□□□ 0.5
SNCA-203ENST00000394986 AURKBQ96GD4 344 aaPredicted RBP18.2■□□□□ 0.5
SNCA-203ENST00000394986 WIF1Q9Y5W5 379 aa18.2■□□□□ 0.5
SNCA-203ENST00000394986 TENM4Q6N022 2769 aa18.2■□□□□ 0.5
SNCA-203ENST00000394986 EML6Q6ZMW3 1958 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 MYO18BQ8IUG5 2567 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 NPIPA5A0A0B4J1W7 369 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 B4DXG7 233 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 NPIPA7E9PJI5 369 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 ANP32DO95626 131 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 NPIPA8P0DM63 369 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 OR12D1P0DN82 309 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 GDF1P27539 372 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 GAS1P54826 345 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 GNGT1P63211 74 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 IRX1P78414 480 aaPredicted RBP18.19■□□□□ 0.5
SNCA-203ENST00000394986 STX5Q13190 355 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 SNTA1Q13424 505 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 UBAP2LQ14157 1087 aaKnown RBP18.19■□□□□ 0.5
SNCA-203ENST00000394986 PAGE3Q5JUK9 113 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 COX20Q5RI15 118 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 METTL21CQ5VZV1 264 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 OR5M10Q6IEU7 315 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 APOOLQ6UXV4 268 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 FGD2Q7Z6J4 655 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 MARCH3Q86UD3 253 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 CHERPQ8IWX8 916 aaKnown RBP18.19■□□□□ 0.5
SNCA-203ENST00000394986 OR4C3Q8NH37 302 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 PRR7Q8TB68 274 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 MIPOL1Q8TD10 442 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 PAIP1Q9H074 479 aaKnown RBP18.19■□□□□ 0.5
SNCA-203ENST00000394986 C15orf41Q9Y2V0 281 aa18.19■□□□□ 0.5
SNCA-203ENST00000394986 NUP214P35658 2090 aaPredicted RBP18.19■□□□□ 0.5
SNCA-203ENST00000394986 SNPHO15079 494 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 KHKP50053 298 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 RNF144AP50876 292 aaPredicted RBP18.18■□□□□ 0.5
SNCA-203ENST00000394986 KRTCAP3Q53RY4 240 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 TIGD3Q6B0B8 471 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 WDSUB1Q8N9V3 476 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 OR1J4Q8NGS1 313 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 ZFP90Q8TF47 636 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 RABEP2Q9H5N1 569 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 SLAMF8Q9P0V8 285 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 ABCG2Q9UNQ0 655 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 OSGIN2Q9Y236 505 aa18.18■□□□□ 0.5
SNCA-203ENST00000394986 RP1L1Q8IWN7 2480 aaPredicted RBP18.18■□□□□ 0.5
SNCA-203ENST00000394986 A0A1B0GTH9 108 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 OXSR1O95747 527 aaPredicted RBP18.17■□□□□ 0.5
SNCA-203ENST00000394986 HOXB9P17482 250 aaPredicted RBP18.17■□□□□ 0.5
SNCA-203ENST00000394986 TRPC1P48995 793 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 FUT5Q11128 374 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 BNC2Q6ZN30 1099 aaPredicted RBP18.17■□□□□ 0.5
SNCA-203ENST00000394986 SPPL2CQ8IUH8 684 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 MSRB3Q8IXL7 192 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 GHDCQ8N2G8 530 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 GATSQ8NAP1 163 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 XAGE5Q8WWM1 108 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 ELAC2Q9BQ52 826 aaKnown RBP18.17■□□□□ 0.5
SNCA-203ENST00000394986 G6PC3Q9BUM1 346 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 UBQLN3Q9H347 655 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 TMEM45AQ9NWC5 275 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 TNFRSF10DQ9UBN6 386 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 B4GALT7Q9UBV7 327 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 FBXL2Q9UKC9 423 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 PCDHB14Q9Y5E9 798 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 PCDHGB3Q9Y5G1 929 aa18.17■□□□□ 0.5
SNCA-203ENST00000394986 DUXAA6NLW8 204 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 HMGN4O00479 90 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 ZCCHC18P0CG32 403 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 ATP6V1C1P21283 382 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 DRD4P21917 467 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 MVDP53602 400 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNCA-203ENST00000394986 C16orf62Q7Z3J2 963 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 CHDHQ8NE62 594 aaPredicted RBP18.16■□□□□ 0.5
SNCA-203ENST00000394986 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 SDF2Q99470 211 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 TBL1XR1Q9BZK7 514 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 SLC6A15Q9H2J7 730 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 TPT1P8Q9HAU6 139 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 SAR1AQ9NR31 198 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 PLSCR2Q9NRY7 297 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 SLC25A37Q9NYZ2 338 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 SVILO95425 2214 aa18.16■□□□□ 0.5
SNCA-203ENST00000394986 A0A096LPI6 279 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 A0A1W2PP18 115 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 PRAMEF27A3QJZ7 478 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 FCMRO60667 390 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 ZIC2O95409 532 aaPredicted RBP18.15■□□□□ 0.5
SNCA-203ENST00000394986 ELAVL4P26378 380 aaKnown RBP18.15■□□□□ 0.5
SNCA-203ENST00000394986 KCNC4Q03721 635 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 SLC10A1Q14973 349 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 TOMM20Q15388 145 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 FLYWCH1Q4VC44 716 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 HEPHL1Q6MZM0 1159 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms