RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 NUS1Q96E22 293 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 KCNN2Q9H2S1 579 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 C11orf49Q9H6J7 331 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 C3orf14Q9HBI5 128 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 INSL6Q9Y581 213 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 TRBV5-3A0A0A0MS03 114 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 OR6C74A6NCV1 312 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 PRRT4C9JH25 899 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 ANXA3P12429 323 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF30P17039 623 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 P2RX3P56373 397 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 SGCGQ13326 291 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF79Q15937 498 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 PSRC1Q6PGN9 363 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 TRAM1L1Q8N609 369 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 MRPL43Q8N983 215 aaKnown RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 FOXN4Q96NZ1 517 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 LRRC3BQ96PB8 259 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 CPEB1Q9BZB8 566 aaKnown RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 FZD3Q9NPG1 666 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 FLVCR2Q9UPI3 526 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 ARPC5O15511 151 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 SIX6O95475 246 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ARAFP10398 606 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 C6P13671 934 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 XCR1P46094 333 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 SLC6A12P48065 614 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 SEC13P55735 322 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 OR12D2P58182 307 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 TAP2Q03519 686 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 GPR50Q13585 617 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 LTB4RQ15722 352 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 PGBD2Q6P3X8 592 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 LYPD4Q6UWN0 246 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 OR4K13Q8NH42 304 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ASB12Q8WXK4 309 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ELMOD3Q96FG2 381 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 C1GALT1Q9NS00 363 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
NFKB1-202ENST00000394820 WDR45Q9Y484 360 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 TRAV27A0A087WT01 109 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 MPC1LP0DKB6 136 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF250P15622 560 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 HK1P19367 917 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ELK1P19419 428 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ENDOUP21128 410 aaKnown RBP12.41□□□□□ -0.42
NFKB1-202ENST00000394820 DEFB134Q4QY38 66 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 Q5BKY6 102 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ZDHHC20Q5W0Z9 365 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 TBC1D19Q8N5T2 526 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 OR9A2Q8NGT5 310 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 CREB3L4Q8TEY5 395 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 OR8D1Q8WZ84 308 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 RGMAQ96B86 450 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 LMLNQ96KR4 655 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 SYNPO2LQ9H987 977 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 BAIAP2Q9UQB8 552 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 HYKKA2RU49 373 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 RIIAD1A6NNX1 92 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 HEPACAM2A8MVW5 462 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF780AO75290 641 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-202ENST00000394820 EDNRAP25101 427 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 PTPN6P29350 595 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 CCR8P51685 355 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 RRAS2P62070 204 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-202ENST00000394820 BEX5Q5H9J7 111 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 PRICKLE2Q7Z3G6 844 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 NKAIN4Q8IVV8 208 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 PRSS58Q8IYP2 241 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 ACBD7Q8N6N7 88 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 AMER3Q8N944 861 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 GALNT6Q8NCL4 622 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 OR4M1Q8NGD0 313 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 UBTD2Q8WUN7 234 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 COQ10AQ96MF6 247 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 RC3H2Q9HBD1 1191 aaKnown RBP12.41□□□□□ -0.42
NFKB1-202ENST00000394820 POT1Q9NUX5 634 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 TAAR2Q9P1P5 351 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 MGAT4CQ9UBM8 478 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 FKBP7Q9Y680 259 aa12.41□□□□□ -0.42
NFKB1-202ENST00000394820 GFYI3L273 518 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 ERVH48-1M5A8F1 160 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PRICKLE3O43900 615 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PRKNO60260 465 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-202ENST00000394820 DOK2O60496 412 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 DDOSTP39656 456 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PPP1R16AQ96I34 528 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 LYSMD1Q96S90 227 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
NFKB1-202ENST00000394820 NEUROG3Q9Y4Z2 214 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PLXNA3P51805 1871 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 ADRA2AP08913 450 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 LCN1P31025 176 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 MLLT3P42568 568 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms