RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SLC41A3Q96GZ6 507 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 ZNF350Q9GZX5 532 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 OR51E2Q9H255 320 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 ZBTB20Q9HC78 741 aaPredicted RBP14.02□□□□□ -0.17
GPC3-202ENST00000394299 ZNF232Q9UNY5 417 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 MAU2Q9Y6X3 613 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 M0R3G1 203 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 MAOAP21397 527 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 S1PR1P21453 382 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 NUDT1P36639 197 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 OMPP47874 163 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 SNRPGP62308 76 aaKnown RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 PLAURQ03405 335 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 ST3GAL3Q11203 375 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 NNATQ16517 81 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 MRPL2Q5T653 305 aaKnown RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 PRAMEF17Q5VTA0 474 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 KLHL35Q6PF15 583 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 RRM2BQ7LG56 351 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 BTLAQ7Z6A9 289 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 CDRT4Q8N9R6 151 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 WDR36Q8NI36 951 aaKnown RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 C1orf216Q8TAB5 229 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 PLGRKTQ9HBL7 147 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 SOHLH2Q9NX45 425 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 NDOR1Q9UHB4 597 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 WDR87Q6ZQQ6 2873 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 A0A087WV62 115 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 EFCAB9A8MZ26 197 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 MPZL2O60487 215 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 STX11O75558 287 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 HTR2AP28223 471 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 OPRL1P41146 370 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 SEPHS1P49903 392 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 STARD6P59095 220 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 CDK5Q00535 292 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 COX10Q12887 443 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 ZNF155Q12901 538 aaPredicted RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 LARS2Q15031 903 aaKnown RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 EXOSC6Q5RKV6 272 aaKnown RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 PLAG1Q6DJT9 500 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 CD300LDQ6UXZ3 194 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 WDR88Q6ZMY6 472 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 ZNF619Q8N2I2 560 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 VWA5B2Q8N398 1253 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 MMABQ96EY8 250 aaPredicted RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 TSSK6Q9BXA6 273 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 SAP130Q9H0E3 1048 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 MRPS17Q9Y2R5 130 aaKnown RBP14.01□□□□□ -0.17
GPC3-202ENST00000394299 IFT52Q9Y366 437 aa14.01□□□□□ -0.17
GPC3-202ENST00000394299 LOC100506127A0A0U1RQW1 187 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SH3D21A4FU49 640 aa14□□□□□ -0.17
GPC3-202ENST00000394299 AGRPO00253 132 aa14□□□□□ -0.17
GPC3-202ENST00000394299 NADKO95544 446 aaPredicted RBP14□□□□□ -0.17
GPC3-202ENST00000394299 AGR2O95994 175 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SLC35E2P0CK97 266 aa14□□□□□ -0.17
GPC3-202ENST00000394299 MAP3K8P41279 467 aa14□□□□□ -0.17
GPC3-202ENST00000394299 GABRA4P48169 554 aa14□□□□□ -0.17
GPC3-202ENST00000394299 PCYT1AP49585 367 aa14□□□□□ -0.17
GPC3-202ENST00000394299 PSG6Q00889 435 aa14□□□□□ -0.17
GPC3-202ENST00000394299 TEKQ02763 1124 aa14□□□□□ -0.17
GPC3-202ENST00000394299 ZNF91Q05481 1191 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SNAPC1Q16533 368 aa14□□□□□ -0.17
GPC3-202ENST00000394299 MOGQ16653 247 aa14□□□□□ -0.17
GPC3-202ENST00000394299 ZNF614Q8N883 585 aa14□□□□□ -0.17
GPC3-202ENST00000394299 OR8J1Q8NGP2 316 aa14□□□□□ -0.17
GPC3-202ENST00000394299 LRR1Q96L50 414 aa14□□□□□ -0.17
GPC3-202ENST00000394299 CLDN16Q9Y5I7 305 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SEC16AO15027 2179 aa14□□□□□ -0.17
GPC3-202ENST00000394299 WDFY4Q6ZS81 3184 aa14□□□□□ -0.17
GPC3-202ENST00000394299 HYKKA2RU49 373 aa14□□□□□ -0.17
GPC3-202ENST00000394299 EFCAB10A6NFE3 127 aa14□□□□□ -0.17
GPC3-202ENST00000394299 CDC42EP2O14613 210 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SLC22A1O15245 554 aa14□□□□□ -0.17
GPC3-202ENST00000394299 MAGEB3O15480 346 aa14□□□□□ -0.17
GPC3-202ENST00000394299 AIREO43918 545 aa14□□□□□ -0.17
GPC3-202ENST00000394299 IGKV1D-16P01601 117 aa14□□□□□ -0.17
GPC3-202ENST00000394299 GNSP15586 552 aa14□□□□□ -0.17
GPC3-202ENST00000394299 OR1D5P58170 312 aa14□□□□□ -0.17
GPC3-202ENST00000394299 NXPH1P58417 271 aa14□□□□□ -0.17
GPC3-202ENST00000394299 STX4Q12846 297 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SNAP47Q5SQN1 464 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SLC30A6Q6NXT4 461 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SLC46A3Q7Z3Q1 461 aa14□□□□□ -0.17
GPC3-202ENST00000394299 DYNC2LI1Q8TCX1 351 aa14□□□□□ -0.17
GPC3-202ENST00000394299 GNPDA2Q8TDQ7 276 aa14□□□□□ -0.17
GPC3-202ENST00000394299 TCTN2Q96GX1 697 aa14□□□□□ -0.17
GPC3-202ENST00000394299 NECTIN3Q9NQS3 549 aa14□□□□□ -0.17
GPC3-202ENST00000394299 DUSP22Q9NRW4 184 aa14□□□□□ -0.17
GPC3-202ENST00000394299 SYNDIG1LA6NDD5 238 aa13.99□□□□□ -0.17
GPC3-202ENST00000394299 HYAL3O43820 417 aaPredicted RBP13.99□□□□□ -0.17
GPC3-202ENST00000394299 SRPX2O60687 465 aaPredicted RBP13.99□□□□□ -0.17
GPC3-202ENST00000394299 ADAM11O75078 769 aa13.99□□□□□ -0.17
GPC3-202ENST00000394299 KCNK2O95069 426 aa13.99□□□□□ -0.17
GPC3-202ENST00000394299 DBTP11182 482 aaKnown RBP13.99□□□□□ -0.17
GPC3-202ENST00000394299 MLLT3P42568 568 aaPredicted RBP13.99□□□□□ -0.17
GPC3-202ENST00000394299 EMDP50402 254 aa13.99□□□□□ -0.17
GPC3-202ENST00000394299 PGDP52209 483 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms