RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SYNPO2LQ9H987 977 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 PRKAG2Q9UGJ0 569 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 CBLCQ9ULV8 474 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 POLHQ9Y253 713 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 MAU2Q9Y6X3 613 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 PIP5K1CO60331 668 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 PCDH8O95206 1070 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 RGS8P57771 180 aaPredicted RBP17.62■□□□□ 0.41
CBX1-202ENST00000393408 FZD5Q13467 585 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 C16orf62Q7Z3J2 963 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 GDF7Q7Z4P5 450 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 GIMAP5Q96F15 307 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 JAM3Q9BX67 310 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 RAB11FIP5Q9BXF6 653 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 KLHL28Q9NXS3 571 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 KLHL21Q9UJP4 597 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 KCNK6Q9Y257 313 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 ALG5Q9Y673 324 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 GOLGA4Q13439 2230 aaKnown RBP17.62■□□□□ 0.41
CBX1-202ENST00000393408 CD8B2A6NJW9 211 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 FCMRO60667 390 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 SLC2A10O95528 541 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 PRKAR1AP10644 381 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 CD8BP10966 210 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 PSKH1P11801 424 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 RAB8AP61006 207 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 PAMR1Q6UXH9 720 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 MBOAT2Q6ZWT7 520 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 CACUL1Q86Y37 369 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 FBXL6Q8N531 539 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 SECISBP2Q96T21 854 aaKnown RBP17.61■□□□□ 0.41
CBX1-202ENST00000393408 MCHR1Q99705 422 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 ACTRT3Q9BYD9 372 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 SYNDIG1Q9H7V2 258 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 APOBEC3BQ9UH17 382 aaKnown RBP17.61■□□□□ 0.41
CBX1-202ENST00000393408 LYRM1O43325 122 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 CFL1P23528 166 aaKnown RBP17.61■□□□□ 0.41
CBX1-202ENST00000393408 PDX1P52945 283 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 COL9A2Q14055 689 aaPredicted RBP17.61■□□□□ 0.41
CBX1-202ENST00000393408 IRF4Q15306 451 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 LTB4RQ15722 352 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 MZT2AQ6P582 158 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 ZNF322Q6U7Q0 402 aaPredicted RBP17.61■□□□□ 0.41
CBX1-202ENST00000393408 TMEM91Q6ZNR0 172 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 LIX1LQ8IVB5 337 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 PEX5LQ8IYB4 626 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 OR2L3Q8NG85 312 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 OR52E1Q8NGJ3 308 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 TMEM255BQ8WV15 326 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 KAT2AQ92830 837 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 SLC35A4Q96G79 324 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 SLC41A3Q96GZ6 507 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 KCNJ15Q99712 375 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 CSNK1G3Q9Y6M4 447 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 CDH10Q9Y6N8 788 aa17.61■□□□□ 0.41
CBX1-202ENST00000393408 C2orf92A0A1B0GVN3 265 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 J3QRE1 110 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 SOCS6O14544 535 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 TRIM3O75382 744 aaPredicted RBP17.6■□□□□ 0.41
CBX1-202ENST00000393408 ABATP80404 500 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 AGBL4Q5VU57 503 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 KLBQ86Z14 1044 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 SARGQ9BW04 601 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 HINT3Q9NQE9 182 aaKnown RBP17.6■□□□□ 0.41
CBX1-202ENST00000393408 IL20RAQ9UHF4 553 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 PLEKHM1Q9Y4G2 1056 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 TBC1D3BA6NDS4 549 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 FAM25AB3EWG3 89 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 FAM25CB3EWG5 89 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 FAM25GB3EWG6 89 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 OR5F1O95221 314 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 PEBP1P30086 187 aaKnown RBP17.6■□□□□ 0.41
CBX1-202ENST00000393408 CLDN20P56880 219 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 ERVK-21P61565 698 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 FAM78AQ5JUQ0 283 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 TIGD3Q6B0B8 471 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 HEPHL1Q6MZM0 1159 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 TRILQ7L0X0 811 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 SIRT6Q8N6T7 355 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 YIPF7Q8N8F6 280 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 OR2T33Q8NG76 320 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 TIMM29Q9BSF4 260 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 ACOXLQ9NUZ1 547 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 TNFRSF10DQ9UBN6 386 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 CLCA3PQ9Y6N3 262 aa17.6■□□□□ 0.41
CBX1-202ENST00000393408 FAM240BA0A1B0GVZ2 78 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 OR6C70A6NIJ9 312 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 OR52A4PA6NMU1 304 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 SGK494L7N484 410 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 CDC42EP2O14613 210 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 MID1O15344 667 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 GALP22466 123 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 ATP6V1E1P36543 226 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 TSFMP43897 325 aaKnown RBP17.59■□□□□ 0.41
CBX1-202ENST00000393408 CAMK1Q14012 370 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 EFR3AQ14156 821 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 KRT33BQ14525 404 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 AGERQ15109 404 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 SF3A2Q15428 464 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms