RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 OSGIN1Q9UJX0 560 aa3.11□□□□□ -1.91
PHF3-202ENST00000393387 RAB22AQ9UL26 194 aa3.11□□□□□ -1.91
PHF3-202ENST00000393387 PRELID3BQ9Y3B1 194 aa3.11□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3DA0A087WVF3 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3IA0A087WXS9 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3EA0A087X179 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3KA0A087X1G2 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 FAM234BA2RU67 622 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3BA6NDS4 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3FA6NER0 549 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 ANTXRLA6NF34 631 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 OR51F1A6NGY5 319 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SOBPA7XYQ1 873 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3LB9A6J9 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PPP5D1E7EU14 171 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 ADAM23O75077 832 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 CREG1O75629 220 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 GJB3O75712 270 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 ALX3O95076 343 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SIX3O95343 332 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 SLC35G4P0C7Q5 338 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3HP0C7X1 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 AKAIN1P0CW23 69 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 FGF7P21781 194 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 ACHEP22303 614 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MEOX1P50221 254 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 CRISP3P54108 245 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 ARF6P62330 175 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 GPR17Q13304 367 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MLC1Q15049 377 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBCEQ15813 527 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 ZNF74Q16587 644 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SLC5A12Q1EHB4 618 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3GQ6DHY5 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3CQ6IPX1 549 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MED27Q6P2C8 311 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 CLEC17AQ6ZS10 378 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 ERN2Q76MJ5 926 aaKnown RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 ADAMTSL2Q86TH1 951 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 RNF130Q86XS8 419 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TBC1D3Q8IZP1 549 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 LINC00471Q8N535 108 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 OR6M1Q8NGM8 313 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 OR13C5Q8NGS8 318 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 GNPDA2Q8TDQ7 276 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 RAB8BQ92930 207 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PYCR2Q96C36 320 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 RPUSD4Q96CM3 377 aaKnown RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 ZNF845Q96IR2 970 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 FCRL1Q96LA6 429 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MGLLQ99685 303 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PITX2Q99697 317 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MAPKAP1Q9BPZ7 522 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 NIPSNAP3BQ9BS92 247 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 TTPALQ9BTX7 342 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 GON7Q9BXV9 100 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 LRRC3Q9BY71 257 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 POLDIP3Q9BY77 421 aaKnown RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.1□□□□□ -1.915e-7■■■■□ 22.3
PHF3-202ENST00000393387 MED9Q9NWA0 146 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 BET1LQ9NYM9 111 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SERTAD3Q9UJW9 196 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 RCE1Q9Y256 329 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PTGDR2Q9Y5Y4 395 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 A0A1W2PPQ1 181 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MED19A0JLT2 244 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 TMEM218A2RU14 115 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 DRGXA6NNA5 263 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 GSG1L2A8MUP6 293 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 CLDN5O00501 218 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 CAPN5O15484 640 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 TUSC2O75896 110 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 C6orf47O95873 294 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 IL1AP01583 271 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 FUCA1P04066 466 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 KLK1P06870 262 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 CST2P09228 141 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 OR5H8P0DN80 308 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 NFYAP23511 347 aaPredicted RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 PCGF2P35227 344 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PSMD8P48556 350 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 RARRES1P49788 294 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 RIDAP52758 137 aaKnown RBP3.1□□□□□ -1.91
PHF3-202ENST00000393387 OR8G1Q15617 311 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 C6orf141Q5SZD1 244 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 FAM182BQ5T319 152 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PRAMEF18Q5VWM3 479 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 LPCAT3Q6P1A2 487 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MPZL3Q6UWV2 235 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 WDR88Q6ZMY6 472 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 ZNF662Q6ZS27 426 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SLC35D2Q76EJ3 337 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 PPP1R3BQ86XI6 285 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SGPP2Q8IWX5 399 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 NRSN1Q8IZ57 195 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 SLC38A6Q8IZM9 456 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 MUC15Q8N387 334 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 KCNRGQ8N5I3 272 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 LMNTD1Q8N9Z9 388 aa3.1□□□□□ -1.91
PHF3-202ENST00000393387 OR6K3Q8NGY3 331 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms