RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PISDQ9UG56 409 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 SLC2A6Q9UGQ3 507 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 NOP16Q9Y3C1 178 aaKnown RBP7.21□□□□□ -1.25
VTI1A-201ENST00000393077 COL2A1P02458 1487 aaPredicted RBP7.21□□□□□ -1.25
VTI1A-201ENST00000393077 PQBP1O60828 265 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 CSO75390 466 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 CPN1P15169 458 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 SMIM11AP58511 58 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 FOXO1Q12778 655 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 ARHGEF7Q14155 803 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 GUCA2BQ16661 112 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 SLC10A6Q3KNW5 377 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 PLK5Q496M5 336 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 ZRANB3Q5FWF4 1079 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 UBXN11Q5T124 520 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 B3GNTL1Q67FW5 361 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 TAPT1Q6NXT6 567 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 SUSD1Q6UWL2 747 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF705AQ6ZN79 300 aaPredicted RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 TAS1R3Q7RTX0 852 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 ARMC10Q8N2F6 343 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 C10orf53Q8N6V4 93 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 POGLUT1Q8NBL1 392 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 RELTQ969Z4 430 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 L3HYPDHQ96EM0 354 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 IPPKQ9H8X2 491 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 PLAC1Q9HBJ0 212 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 DTX4Q9Y2E6 619 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 PCDHB7Q9Y5E2 793 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 AUP1Q9Y679 476 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 EPCAMP16422 314 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 MAT2AP31153 395 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 DLSTP36957 453 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 PRKXP51817 358 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 CASP9P55211 416 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 RPS25P62851 125 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 VLDLRP98155 873 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 MPPED2Q15777 294 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 NKG7Q16617 165 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM31Q5JXX7 168 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 LAIR2Q6ISS4 152 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 DEFB128Q7Z7B8 93 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 OR9A2Q8NGT5 310 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 OR2G2Q8NGZ5 317 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 FCAMRQ8WWV6 532 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 RBM18Q96H35 190 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 SULT4A1Q9BR01 284 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 EIF5A2Q9GZV4 153 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 FZD8Q9H461 694 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 HHATLQ9HCP6 504 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 NLGN3Q9NZ94 848 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 IL17BQ9UHF5 180 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 FBXL3Q9UKT7 428 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 PCDHB10Q9UN67 800 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 RCE1Q9Y256 329 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 MYO9BQ13459 2157 aa7.21□□□□□ -1.26
VTI1A-201ENST00000393077 PRRC2BQ5JSZ5 2229 aaKnown RBP7.21□□□□□ -1.26
VTI1A-201ENST00000393077 CPED1A4D0V7 1026 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 C5orf51A6NDU8 294 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MOXD2PA6NHM9 499 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PRSS47A8MTI9 375 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 A8MVJ9 347 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 CLDN5O00501 218 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SOX15O60248 233 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PRAMEF12O95522 483 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RBMS1P29558 406 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 AP1S1P61966 158 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 FAM189BP81408 668 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 DEFB115Q30KQ5 88 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RAB6CQ53S08 254 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TSTD2Q5T7W7 516 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 KIAA1161Q6NSJ0 714 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 FAM180AQ6UWF9 173 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TMIGD1Q6UXZ0 262 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SSX7Q7RTT5 188 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TRIM46Q7Z4K8 759 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GPR135Q8IZ08 494 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF248Q8NDW4 579 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 OR9Q2Q8NGE9 314 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RAB6CQ9H0N0 254 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TNFRSF12AQ9NP84 129 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 NT5MQ9NPB1 228 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TUBG2Q9NRH3 451 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ADAMTS5Q9UNA0 930 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RASD1Q9Y272 281 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 EXOSC1Q9Y3B2 195 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 A0A1B0GUL6 1792 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 A0A0U1RQS6 177 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 NAP1L6A6NFF2 107 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RFPL4AA6NLU0 287 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RFPL4AL1F8VTS6 287 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GTPBP1O00178 669 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 LGI1O95970 557 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PRH1P02810 166 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ELK1P19419 428 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ACHEP22303 614 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MPIP34949 423 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 DAOAP59103 153 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms