RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 LDB2O43679 373 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 AHSA1O95433 338 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 CD3GP09693 182 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 GABRA5P31644 462 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 OR6V1Q8N148 313 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 SMAP2Q8WU79 429 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-203ENST00000391813 VSX2P58304 361 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 C18orf21Q32NC0 220 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 NXPE4Q6UWF7 544 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 GLYATL1Q969I3 302 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 C11orf54Q9H0W9 315 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 FBRSQ9HAH7 460 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 INPP5EQ9NRR6 644 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 H7BY64 318 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 CASC3O15234 703 aaKnown RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 TNFP01375 233 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PPP3CBP16298 524 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 HRH2P25021 359 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PLK5Q496M5 336 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 RBPMSQ93062 196 aaKnown RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PRAP1Q96NZ9 151 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 DGAT2Q96PD7 388 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 CDC6Q99741 560 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 CARS2Q9HA77 564 aaKnown RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 SERINC1Q9NRX5 453 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 EPHA6Q9UF33 1036 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 SUSD2Q9UGT4 822 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 C2orf78A6NCI8 922 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 GLOD5A6NK44 160 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 NPIPA5E9PKD4 350 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PTBP1P26599 531 aaKnown RBP eCLIP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 CAMLGP49069 296 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 ALG10Q5BKT4 473 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 NRMQ8IXM6 262 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 ACBD4Q8NC06 268 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 NOX3Q9HBY0 568 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PRMT8Q9NR22 394 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 GDE1Q9NZC3 331 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 NPIPA1Q9UND3 350 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 TJP1Q07157 1748 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 TRAV18A0A075B6X5 111 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PTHP01270 115 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 ACP2P11117 423 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 KCNC1P48547 511 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 MGAT3Q09327 533 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 PIN1Q13526 163 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-203ENST00000391813 TMEM35AQ53FP2 167 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 ENPP7Q6UWV6 458 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 FUNDC1Q8IVP5 155 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 FAM46BQ96A09 425 aa18.62■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF726A6NNF4 738 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 TPMTP51580 245 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 FLYWCH1Q4VC44 716 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 SPRYD4Q8WW59 207 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-203ENST00000391813 RBP7Q96R05 134 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 OR5B12Q96R08 314 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 METTL17Q9H7H0 456 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-203ENST00000391813 RAB3DO95716 219 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 CCKBRP32239 447 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 CHRFAM7AQ494W8 412 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 FAM26DQ5JW98 314 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 KIAA1211LQ6NV74 962 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 OR7G3Q8NG95 312 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 ORAI3Q9BRQ5 295 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 KLHL42Q9P2K6 505 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 MUSKO15146 869 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 IFNA1P01562 189 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 ISL1P61371 349 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 C12orf45Q8N5I9 185 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-203ENST00000391813 ACPTQ9BZG2 426 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 BABAM2Q9NXR7 383 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 TMEM98Q9Y2Y6 226 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 PIGBOS1A0A0B4J2F0 54 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 M0R129 80 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 LALBAP00709 142 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 SUOXP51687 545 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 TAS2R38P59533 333 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 SLC35A2P78381 396 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 CHAF1BQ13112 559 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 ACSM3Q53FZ2 586 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 MARCH8Q5T0T0 291 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 AKR1C8PQ5T2L2 129 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 HES5Q5TA89 166 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 FBXO15Q8NCQ5 510 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-203ENST00000391813 SLC35B4Q969S0 331 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 GSX2Q9BZM3 304 aa18.61■□□□□ 0.57
SHANK1-203ENST00000391813 A0A0D9SG52 128 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 C2orf74A8MZ97 194 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 RUNX3Q13761 415 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 NADSYN1Q6IA69 706 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 RFPL4BQ6ZWI9 263 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 KLK6Q92876 244 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF689Q96CS4 500 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-203ENST00000391813 PDLIM5Q96HC4 596 aaKnown RBP18.6■□□□□ 0.57
SHANK1-203ENST00000391813 PAAF1Q9BRP4 392 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 MYO18AQ92614 2054 aaKnown RBP18.6■□□□□ 0.57
SHANK1-203ENST00000391813 POLR1CO15160 346 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-203ENST00000391813 AKAIN1P0CW23 69 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 ADRB3P13945 408 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 HLA-DMAP28067 261 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms