RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZMYND19Q96E35 227 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 NINQ8N4C6 2090 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PTPN2P17706 415 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 GRK5P34947 590 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 TEAD2Q15562 447 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MINDY4Q4G0A6 757 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 ALKAL2Q6UX46 152 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 DNAJA3Q96EY1 480 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MNTQ99583 582 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 HHATLQ9HCP6 504 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZAR1LA6NP61 321 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 STK25O00506 426 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 B4GALT3O60512 393 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SOD2P04179 222 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 C1SP09871 688 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SNRPBP14678 240 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PKLRP30613 574 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 CCR6P51684 374 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 TIAL1Q01085 375 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MGAT3Q09327 533 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF385BQ569K4 471 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SYT14P1Q58G82 188 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 VITQ6UXI7 678 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLCO4C1Q6ZQN7 724 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 VRK2Q86Y07 508 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MMP21Q8N119 569 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 JAGN1Q8N5M9 183 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF615Q8N8J6 731 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF248Q8NDW4 579 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 CREB3L4Q8TEY5 395 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC25A18Q9H1K4 315 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PPA2Q9H2U2 334 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MRPS33Q9Y291 106 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PHIPQ8WWQ0 1821 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 FZD7O75084 574 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 EPCAMP16422 314 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MMP11P24347 488 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 PTPN6P29350 595 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MC3RP41968 323 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 RASGEF1AQ8N9B8 481 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 POGLUT1Q8NBL1 392 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 THAP6Q8TBB0 222 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 MAP6Q96JE9 813 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SYNPO2LQ9H987 977 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 C14orf105Q9NVL8 296 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 SOHLH2Q9NX45 425 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 RCE1Q9Y256 329 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
TRAPPC9-201ENST00000389328 F5H0A9 414 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 CTSEP14091 401 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 KIAA1324Q6UXG2 1013 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 C4orf36Q96KX1 117 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR2M2Q96R28 347 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 KATNB1Q9BVA0 655 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 KLHL9Q9P2J3 617 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 TMEM202A6NGA9 273 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 PTH2RP49190 550 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 GPLD1P80108 840 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 E2F1Q01094 437 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 CRYZQ08257 329 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 KLHL26Q53HC5 615 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC9B2Q86UD5 537 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF227Q86WZ6 799 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 KLHDC8AQ8IYD2 350 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 HDDC3Q8N4P3 179 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR4M1Q8NGD0 313 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR6T1Q8NGN1 323 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 IFT46Q9NQC8 304 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 POT1Q9NUX5 634 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 MKL2Q9ULH7 1088 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 FAM171A2A8MVW0 826 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 LRRTM2O43300 516 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 TCRBP04435 133 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 PROS1P07225 676 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 GKN3PP0CG01 181 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 DRD2P14416 443 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 SNRPGP62308 76 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 ACTC1P68032 377 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 ACTA1P68133 377 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 ELOAQ14241 798 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 COL28A1Q2UY09 1125 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 NSMAFQ92636 917 aa12.37□□□□□ -0.43
TRAPPC9-201ENST00000389328 SH2B3Q9UQQ2 575 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms