RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF595Q8IYB9 648 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 TMEFF1Q8IYR6 380 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 FAM160A2Q8N612 972 aaPredicted RBP21.52■■□□□ 1.04
VPS16-201ENST00000380443 OSTF1Q92882 214 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 SLC38A2Q96QD8 506 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 TVP23BQ9NYZ1 205 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 ERGIC3Q9Y282 383 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 A3GALT2U3KPV4 340 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 RDH16O75452 317 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 NKX2-2O95096 273 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 IGFBP1P08833 259 aaPredicted RBP21.52■■□□□ 1.04
VPS16-201ENST00000380443 NID1P14543 1247 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 OMPP47874 163 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 RGS6P49758 472 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 MAZP56270 477 aaKnown RBP21.52■■□□□ 1.04
VPS16-201ENST00000380443 BIKQ13323 160 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 SYT16Q17RD7 645 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 KLHL22Q53GT1 634 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 PRICKLE2Q7Z3G6 844 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 GDF7Q7Z4P5 450 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 WDR53Q7Z5U6 358 aaPredicted RBP21.52■■□□□ 1.04
VPS16-201ENST00000380443 RNF113BQ8IZP6 322 aaKnown RBP21.52■■□□□ 1.04
VPS16-201ENST00000380443 CLDN22Q8N7P3 220 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 OR6C4Q8NGE1 309 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 NDNFQ8TB73 568 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 LMX1AQ8TE12 382 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 SLC38A3Q99624 504 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 RAB33BQ9H082 229 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 OCEL1Q9H607 264 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 FBXO8Q9NRD0 319 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 EPHA6Q9UF33 1036 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 OSGIN1Q9UJX0 560 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 CLDN25C9JDP6 229 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 OR10H2O60403 315 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 FOXD2O60548 495 aaPredicted RBP21.51■■□□□ 1.03
VPS16-201ENST00000380443 NADKO95544 446 aaPredicted RBP21.51■■□□□ 1.03
VPS16-201ENST00000380443 TRHRP34981 398 aaPredicted RBP21.51■■□□□ 1.03
VPS16-201ENST00000380443 HNRNPKP61978 463 aaKnown RBP eCLIP21.51■■□□□ 1.03
VPS16-201ENST00000380443 C19orf48Q6RUI8 117 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 CYP4Z2PQ8N1L4 340 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 VWA5B2Q8N398 1253 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 KBTBD8Q8NFY9 601 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 OR9A4Q8NGU2 314 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 FNDC8Q8TC99 324 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 SH3YL1Q96HL8 342 aaPredicted RBP21.51■■□□□ 1.03
VPS16-201ENST00000380443 PLEKHA8Q96JA3 519 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 ZNF578Q96N58 590 aaPredicted RBP21.51■■□□□ 1.03
VPS16-201ENST00000380443 DACH2Q96NX9 599 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 GPA33Q99795 319 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 TSSK6Q9BXA6 273 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 MRPS18AQ9NVS2 196 aaKnown RBP21.51■■□□□ 1.03
VPS16-201ENST00000380443 PLCL2Q9UPR0 1127 aa21.51■■□□□ 1.03
VPS16-201ENST00000380443 TMEM221A6NGB7 291 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 M0R296 226 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 CTNSO60931 367 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 NSA2O95478 260 aaKnown RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 DBTP11182 482 aaKnown RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 ZNF12P17014 697 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 NCS1P62166 190 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 IGLV3-21P80748 117 aaPredicted RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 ZNF91Q05481 1191 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 UBXN2BQ14CS0 331 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 GPR68Q15743 365 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 TCTE1Q5JU00 501 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 OGFOD3Q6PK18 319 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 CAMKK1Q8N5S9 505 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 WDR36Q8NI36 951 aaKnown RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 GPR151Q8TDV0 419 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 MGLLQ99685 303 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 LMF2Q9BU23 707 aaKnown RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 CTPS2Q9NRF8 586 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 MED17Q9NVC6 651 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 C14orf105Q9NVL8 296 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 SLCO1B1Q9Y6L6 691 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 TRAPPC13A5PLN9 417 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 TTC36A6NLP5 189 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 FRS3O43559 492 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 TLX2O43763 284 aaPredicted RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 BRINP1O60477 761 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 EPHA4P54764 986 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 LSM3P62310 102 aaKnown RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 ZNHIT3Q15649 155 aaPredicted RBP21.5■■□□□ 1.03
VPS16-201ENST00000380443 SNAPC1Q16533 368 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 KIF18BQ86Y91 864 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 SIX5Q8N196 739 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 PROKR2Q8NFJ6 384 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 TMEM163Q8TC26 289 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 FGF11Q92914 225 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 CD180Q99467 661 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 MND1Q9BWT6 205 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 STARD5Q9NSY2 213 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 DNAJC27Q9NZQ0 273 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 PCDHGA3Q9Y5H0 932 aa21.5■■□□□ 1.03
VPS16-201ENST00000380443 LMO7DNF2Z398 122 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 CLDN4O14493 209 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 GADD45AP24522 165 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 ZNF136P52737 540 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 MLLT10P55197 1068 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 ACSM5Q6NUN0 579 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 C16orf87Q6PH81 154 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms