RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 C1orf61Q13536 156 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FAM214AQ32MH5 1076 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 EOGTQ5NDL2 527 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ATAD3BQ5T9A4 648 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 PRAMEF8Q5VWM4 474 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 PRAMEF7Q5VXH5 474 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TYW3Q6IPR3 259 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 LINC00299Q6ZSB3 139 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 OR2L13Q8N349 312 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 C9orf43Q8TAL5 461 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 SLC37A2Q8TED4 501 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ZFPM2Q8WW38 1151 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ARSGQ96EG1 525 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TMEM80Q96HE8 168 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 LRR1Q96L50 414 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 MS4A4EQ96PG1 132 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ZFYVE21Q9BQ24 234 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 C6orf62Q9GZU0 229 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 HRASLS2Q9NWW9 162 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 NTMQ9P121 344 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 MMP17Q9ULZ9 603 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CYP8B1Q9UNU6 501 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 LIPT1Q9Y234 373 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 KLK4Q9Y5K2 254 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FUOMA2VDF0 154 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FAM170BA6NMN3 283 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 SYT5O00445 386 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FGF17O60258 216 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 KIAA0513O60268 411 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ALOX12P18054 663 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CSTF2P33240 577 aaKnown RBP eCLIP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TUBA1BP68363 451 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CLEC12AQ5QGZ9 265 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CDC73Q6P1J9 531 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 USP53Q70EK8 1073 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TUBA1AQ71U36 451 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ABI3BPQ7Z7G0 1075 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FAM26EQ8N5C1 309 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 GPBAR1Q8TDU6 330 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CLIP3Q96DZ5 547 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF582Q96NG8 517 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 POLDIP3Q9BY77 421 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 POLE4Q9NR33 117 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 DAPK2Q9UIK4 370 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 PHF11Q9UIL8 331 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 NDRG2Q9UN36 371 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CARD8Q9Y2G2 431 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 NPIPA5A0A0B4J1W7 369 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 C10orf142B7Z368 130 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 NPIPA7E9PJI5 369 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CCRL2O00421 344 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CT62P0C5K7 136 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CCNYL3P0C7X3 344 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 NPIPA8P0DM63 369 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 OMPP47874 163 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 RGS8P57771 180 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ARPC4P59998 168 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 UBE2IP63279 158 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 DNASE1L3Q13609 305 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 OXA1LQ15070 435 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 NCF4Q15080 339 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 GPR68Q15743 365 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 SNAPC1Q16533 368 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 MAPK14Q16539 360 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FLYWCH1Q4VC44 716 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF628Q5EBL2 1059 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FHL5Q5TD97 284 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF730Q6ZMV8 503 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CAMKVQ8NCB2 501 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 OR52I1Q8NGK6 324 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 BAHD1Q8TBE0 780 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TMEM255BQ8WV15 326 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 PIK3R3Q92569 461 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TRMT61AQ96FX7 289 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 DACH2Q96NX9 599 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 CITED4Q96RK1 184 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 SDF2Q99470 211 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 GDF15Q99988 308 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 FAM60AQ9NP50 221 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ADAP2Q9NPF8 381 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 TBCCD1Q9NVR7 557 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 IL20RAQ9UHF4 553 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 SLC13A4Q9UKG4 626 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF443Q9Y2A4 671 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 RPL36Q9Y3U8 105 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 WDR45Q9Y484 360 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 HS3ST3A1Q9Y663 406 aa7.43□□□□□ -1.22
PDLIM5-204ENST00000380176 LINC00854A0A1B0GVQ3 168 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 CBFA2T3O75081 653 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 CH25HO95992 272 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TNFP01375 233 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 SCG5P05408 212 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 HNRNPCP07910 306 aaKnown RBP eCLIP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 PRG2P13727 222 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 PORP16435 677 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TYRP1P17643 537 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 PRKAR1BP31321 381 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 ETV5P41161 510 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 GPR4P46093 362 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms