RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NDUFB2O95178 105 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 YPEL5P62699 121 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ZP2Q05996 745 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 RAB11BQ15907 218 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 C6orf141Q5SZD1 244 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 GAREM1Q9H706 876 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ZNF160Q9HCG1 818 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ARMC1Q9NVT9 282 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 FAM118AQ9NWS6 357 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 LOC285095A0A1B0GVY8 99 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 F5H5K5 113 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 UGT2B10P36537 528 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SOX3P41225 446 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ARF3P61204 181 aaPredicted RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 CSNK2A1P68400 391 aaPredicted RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 ARF1P84077 181 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 TAP2Q03519 686 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 CEACAM7Q14002 265 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 LRRC37A5PQ49AS3 106 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 CTSL3PQ5NE16 218 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 NKAIN2Q5VXU1 208 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SYCE2Q6PIF2 218 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ABHD12BQ7Z5M8 362 aaPredicted RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 FAM174AQ8TBP5 190 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 TCTN2Q96GX1 697 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 OR6C1Q96RD1 312 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ACTR6Q9GZN1 396 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 PITHD1Q9GZP4 211 aaPredicted RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 LIN28AQ9H9Z2 209 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 BTNL2Q9UIR0 455 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 RIMS3Q9UJD0 308 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ZNF175Q9Y473 711 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ZFAND5O76080 213 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 BMP1P13497 986 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 CD46P15529 392 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SLC2A5P22732 501 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SGSHP51688 502 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 MOGSQ13724 837 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 OR5M10Q6IEU7 315 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 IL20RBQ6UXL0 311 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 DCDC5Q6ZRR9 648 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 TDHQ8IZJ6 230 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SACM1LQ9NTJ5 587 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ENPP4Q9Y6X5 453 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 MROH6A6NGR9 719 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 H7C417 338 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 S100A1P23297 94 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 EIF2S3P41091 472 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 OR5AK2Q8NH90 309 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 NPRL2Q8WTW4 380 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SLC6A17Q9H1V8 727 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 SLITRK5O94991 958 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 MTNR1AP48039 350 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 MAT1AQ00266 395 aaKnown RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 PIN1Q13526 163 aaPredicted RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 SCGB1C1Q8TD33 95 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 GPN2Q9H9Y4 310 aaPredicted RBP12.85□□□□□ -0.35
GPC6-201ENST00000377047 POT1Q9NUX5 634 aa12.85□□□□□ -0.35
GPC6-201ENST00000377047 A6NIZ1 184 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SOCS7O14512 581 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 HTR3BO95264 441 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 ADAP00813 363 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 FUT1P19526 365 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 AOAHP28039 575 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 CRABP1P29762 137 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 RAP1BP61224 184 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 RAP1AP62834 184 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 GALNT1Q10472 559 aaPredicted RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 TRIM61Q5EBN2 209 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 FAM71F1Q96KD3 344 aaPredicted RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 HDHD5Q9BXW7 423 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SOBPA7XYQ1 873 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SNNO75324 88 aaPredicted RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 SPHARQ15513 63 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 COQ5Q5HYK3 327 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 ZNF285Q96NJ3 590 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 MOV10Q9HCE1 1003 aaKnown RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 CBLCQ9ULV8 474 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SLC35A3Q9Y2D2 325 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 CSF2P04141 144 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 HMGN2P05204 90 aaKnown RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 RAC2P15153 192 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 SDC1P18827 310 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 PRKXP51817 358 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 C19orf47Q8N9M1 422 aaKnown RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 ZBTB8BQ8NAP8 495 aaPredicted RBP12.84□□□□□ -0.35
GPC6-201ENST00000377047 ACPTQ9BZG2 426 aa12.84□□□□□ -0.35
GPC6-201ENST00000377047 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms