RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ADAMTS15Q8TE58 950 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 HOXB13Q92826 284 aaPredicted RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 DUSP22Q9NRW4 184 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 SLC6A5Q9Y345 797 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 NCOA6Q14686 2063 aaPredicted RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 KLF11O14901 512 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 UTS2O95399 124 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 C6orf47O95873 294 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 HMGN2P05204 90 aaKnown RBP20.13■□□□□ 0.81
SRM-201ENST00000376957 KITP10721 976 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 COX6B1P14854 86 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 BMP7P18075 431 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 ATP6V1C1P21283 382 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 DPP4P27487 766 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 ZFP36L2P47974 494 aaKnown RBP20.13■□□□□ 0.81
SRM-201ENST00000376957 DSCR4P56555 118 aaPredicted RBP20.13■□□□□ 0.81
SRM-201ENST00000376957 NUP107P57740 925 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 HIST2H2BCQ6DN03 193 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 OGFOD2Q6N063 350 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 YRDCQ86U90 279 aaKnown RBP20.13■□□□□ 0.81
SRM-201ENST00000376957 SLC16A11Q8NCK7 471 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 OR8J2Q8NGG1 315 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 PIK3R3Q92569 461 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 ATP6V1G3Q96LB4 118 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 ZBTB18Q99592 522 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 ACTRT3Q9BYD9 372 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 OR2B2Q9GZK3 357 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 KCNJ16Q9NPI9 418 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 CAMK2AQ9UQM7 478 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 RNF6Q9Y252 685 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 NCKAP5O14513 1909 aa20.13■□□□□ 0.81
SRM-201ENST00000376957 PHF3Q92576 2039 aaKnown RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 DUXAA6NLW8 204 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 HSPB2A8KAH6 182 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 RNASET2O00584 256 aaKnown RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 FADS1O60427 444 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 GLI4P10075 376 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 SOAT1P35610 550 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 MAP3K8P41279 467 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 POU6F2P78424 691 aaPredicted RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 LASP1Q14847 261 aaKnown RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 HSPB2Q16082 182 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.12■□□□□ 0.81
SRM-201ENST00000376957 OR5M10Q6IEU7 315 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 CDC73Q6P1J9 531 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 NCCRP1Q6ZVX7 275 aaPredicted RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 MARVELD2Q8N4S9 558 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 ZNF527Q8NB42 609 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 LILRB4Q8NHJ6 448 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 PIWIL2Q8TC59 973 aaKnown RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 RNF138Q8WVD3 245 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 TESCQ96BS2 214 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 GIMAP5Q96F15 307 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 LRRC46Q96FV0 321 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 SFXN2Q96NB2 322 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 BTBD2Q9BX70 525 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 UGT2B28Q9BY64 529 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 PRDM14Q9GZV8 571 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 PIGUQ9H490 435 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 VIPAS39Q9H9C1 493 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 SIRT3Q9NTG7 399 aaPredicted RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 STOML1Q9UBI4 398 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 FAM215AQ9Y5M1 114 aa20.12■□□□□ 0.81
SRM-201ENST00000376957 UTP20O75691 2785 aaKnown RBP20.12■□□□□ 0.81
SRM-201ENST00000376957 GXYLT2A0PJZ3 443 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 LINC01387J3KSC0 135 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 SCDO00767 359 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 NDUFB5O43674 189 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 KCNK2O95069 426 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 EPPINO95925 133 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 IL2RAP01589 272 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 LRRC74AQ0VAA2 488 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 DUSP5Q16690 384 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 RIPPLY2Q5TAB7 128 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 ZNF787Q6DD87 383 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 NXNQ6DKJ4 435 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 LACC1Q8IV20 430 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 FBXO30Q8TB52 745 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 DYDC1Q8WWB3 177 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 MARVELD3Q96A59 401 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 YIPF4Q9BSR8 244 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 HOXD1Q9GZZ0 328 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 UBQLN4Q9NRR5 601 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 MARCOQ9UEW3 520 aaPredicted RBP20.11■□□□□ 0.81
SRM-201ENST00000376957 FREM3P0C091 2139 aa20.11■□□□□ 0.81
SRM-201ENST00000376957 PRSS51A0A1B0GVH4 220 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 HMGB1P1B2RPK0 211 aaPredicted RBP20.1■□□□□ 0.81
SRM-201ENST00000376957 ANGPTL1O95841 491 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 NGFRP08138 427 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 ACP2P11117 423 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 CHMP24386 653 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 S100A3P33764 101 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 GAS1P54826 345 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 STX5Q13190 355 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 OR4F3Q6IEY1 312 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 CHMP1BQ7LBR1 199 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 MISPQ8IVT2 679 aa20.1■□□□□ 0.81
SRM-201ENST00000376957 WDR75Q8IWA0 830 aaKnown RBP20.1■□□□□ 0.81
SRM-201ENST00000376957 OR4A15Q8NGL6 344 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms