RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GGTA1PQ4G0N0 100 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 SLC46A3Q7Z3Q1 461 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NTN4Q9HB63 628 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 SRA1Q9HD15 236 aaKnown RBP6.17□□□□□ -1.42
SMC1A-202ENST00000375340 AKIP1Q9NQ31 210 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
SMC1A-202ENST00000375340 BACE2Q9Y5Z0 518 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 A0A0G2JPF8 293 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 A0A0X1KG70 313 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 HNRNPCL3B7ZW38 293 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 HNRNPCL4P0DMR1 293 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 ITGB8P26012 769 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 EPHA2P29317 976 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 ETV5P41161 510 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 ETV1P50549 477 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 QSOX2Q6ZRP7 698 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NUP54Q7Z3B4 507 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 POGLUT1Q8NBL1 392 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NR4A3Q92570 626 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 DUS3LQ96G46 650 aaKnown RBP6.17□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF559Q9BR84 538 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TM7SF3Q9NS93 570 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 OR6C2Q9NZP2 312 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 ANK1P16157 1881 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 HRO43593 1189 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 ARL6IP5O75915 188 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 PRLHRP49683 370 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TRAM1Q15629 374 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 IQCF2Q8IXL9 164 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 GALNT11Q8NCW6 608 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 OR8J2Q8NGG1 315 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 RPLP0P6Q8NHW5 317 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 CXorf36Q9H7Y0 433 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 PARP14Q460N5 1801 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 SLC16A6O15403 523 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 UBXN7O94888 489 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 S100A6P06703 90 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 CXCR4P61073 352 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 LTB4RQ15722 352 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 LYPD4Q6UWN0 246 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 SETD7Q8WTS6 366 aaKnown RBP6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NECTIN4Q96NY8 510 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TEX10Q9NXF1 929 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NDUFAF4Q9P032 175 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 RASD1Q9Y272 281 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NINQ8N4C6 2090 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TCRBV21S2A2A0A5A6 115 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 SGK494L7N484 410 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TFP02787 698 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 IMPA1P29218 277 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 P2RY14Q15391 338 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 IRAK1BP1Q5VVH5 260 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 LCTLQ6UWM7 567 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 PRICKLE2Q7Z3G6 844 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 NSMAFQ92636 917 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 TBL1XR1Q9BZK7 514 aa6.17□□□□□ -1.42
SMC1A-202ENST00000375340 H7C0S8 307 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 K7ESM1 405 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ACP2P11117 423 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 DEFB103AP81534 67 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GRSF1Q12849 480 aaKnown RBP eCLIP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 IRF4Q15306 451 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZMYND11Q15326 602 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZMAT1Q5H9K5 638 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GARNL3Q5VVW2 1013 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 LRRN1Q6UXK5 716 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SYNPRQ8TBG9 265 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PRRC1Q96M27 445 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GABARAPL1Q9H0R8 117 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GSKIPQ9P0R6 139 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ACSL5Q9ULC5 683 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 NTNG1Q9Y2I2 539 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SCN4AP35499 1836 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 M0R036 132 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 FMO6PO60774 539 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PRH1P02810 166 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CD3GP09693 182 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 MAGEA2P43356 314 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF91Q05481 1191 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 DECR1Q16698 335 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF385BQ569K4 471 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SAMD14Q8IZD0 417 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CBARPQ8N350 705 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CHCHD4Q8N4Q1 142 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PIGUQ9H490 435 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ACTL8Q9H568 366 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CA5BQ9Y2D0 317 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PCDHGA2Q9Y5H1 932 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 FAM155AB1AL88 458 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ARPC1BO15143 372 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SPDEFO95238 335 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ITGBL1O95965 494 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 IGLV3-25P01717 112 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 FURINP09958 794 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 DRD2P14416 443 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 UGT2B10P36537 528 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SUOXP51687 545 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 OR5J2Q8NH18 312 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CPNE2Q96FN4 548 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 HRASLS5Q96KN8 279 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms