RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MMP11P24347 488 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CSKP41240 450 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CLCN3P51790 818 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 PIGFQ07326 219 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 MFGE8Q08431 387 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 BBS10Q8TAM1 723 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 DYNC2LI1Q8TCX1 351 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CCNL1Q9UK58 526 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 GOT1P17174 413 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 EVX1P49640 407 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CCR8P51685 355 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 FAM196AQ6ZSG2 479 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 BAP18Q8IXM2 172 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ZNF440Q8IYI8 595 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 SLC24A4Q8NFF2 622 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 LKAAEAR1Q8TD35 194 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 SLC17A6Q9P2U8 582 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 GRHPRQ9UBQ7 328 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 AGO1Q9UL18 857 aaKnown RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 ARPC1BO15143 372 aaKnown RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 CT45A8P0DMV1 189 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CT45A9P0DMV2 189 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CT45A2Q5DJT8 189 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ABHD12BQ7Z5M8 362 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 C2CD4AQ8NCU7 369 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 METTL21AQ8WXB1 218 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 LRFN3Q9BTN0 628 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TAF9BQ9HBM6 251 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TAS2R5Q9NYW4 299 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TREM2Q9NZC2 230 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 SALL3Q9BXA9 1300 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 A8MVM7 634 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 FOXO6A8MYZ6 492 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 NPIPA5E9PKD4 350 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 NPIPA3F8WFD2 350 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ECI2O75521 394 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 APEHP13798 732 aaKnown RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 ACPPP15309 386 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CPOXP36551 454 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 HTRA3P83110 453 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ACSM1Q08AH1 577 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 NOL9Q5SY16 702 aaKnown RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 ZNF695Q8IW36 515 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OR2T4Q8NH00 348 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TVP23CQ96ET8 276 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 COL25A1Q9BXS0 654 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 SIRT7Q9NRC8 400 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 NPIPA1Q9UND3 350 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 LEUTXA8MZ59 168 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 PIPP12273 146 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 ZNF8P17098 575 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 TMEM11P17152 192 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 SDHBP21912 280 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ZNF678Q5SXM1 525 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OR5M3Q8NGP4 307 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 SLC35B3Q9H1N7 401 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ADAP2Q9NPF8 381 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TM7SF3Q9NS93 570 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 MT-CYBP00156 380 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 GALP22466 123 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CCR6P51684 374 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 GPLD1P80108 840 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CYP27C1Q4G0S4 372 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 MFSD14CQ5VZR4 134 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OSBPL2Q9H1P3 480 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CXorf49A8MYA2 514 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 AHCYP23526 432 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 BDKRB1P46663 353 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 KCNJ10P78508 379 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 GPR157Q5UAW9 335 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OR4M1Q8NGD0 313 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 WDR77Q9BQA1 342 aaPredicted RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 H2AFB1P0C5Y9 115 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OR10J4P0C629 311 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 A0A1B0GUH1 482 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 GABARAPH6UMI1 98 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ADRB3P13945 408 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 KCNJ3P48549 501 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 MADCAM1Q13477 382 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 IL17AQ16552 155 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 STEAP4Q687X5 459 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TMEM150AQ86TG1 271 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 SLC6A7Q99884 636 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TEX101Q9BY14 249 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 KCNIP1Q9NZI2 227 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 GPR171O14626 319 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 ALDH2P05091 517 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 TBPP20226 339 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 MRPS5P82675 430 aaKnown RBP6.28□□□□□ -1.4
UBR4-204ENST00000375254 COX19Q49B96 90 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 MDGA2Q7Z553 956 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OR5D14Q8NGL3 314 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 THEM6Q8WUY1 208 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 PTP4A1Q93096 173 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 CEMIPQ8WUJ3 1361 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 PRPS1P60891 318 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 IRF5Q13568 498 aa6.28□□□□□ -1.4
UBR4-204ENST00000375254 OR7D4Q8NG98 312 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms