RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 OR2M7Q8NG81 312 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 PNPT1Q8TCS8 783 aaKnown RBP10.42□□□□□ -0.74
HSPG2-202ENST00000374676 GRHL3Q8TE85 626 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 RAB8BQ92930 207 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 LRRC58Q96CX6 371 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 FAM173AQ9BQD7 235 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 CPPED1Q9BRF8 314 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-202ENST00000374676 HOXD1Q9GZZ0 328 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 SAP130Q9H0E3 1048 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 EFCAB1Q9HAE3 211 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 POLE3Q9NRF9 147 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 DEPPQ9NTK1 212 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 FBXO34Q9NWN3 711 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-202ENST00000374676 ABCG2Q9UNQ0 655 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 POLEQ07864 2286 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 MYO18BQ8IUG5 2567 aa10.42□□□□□ -0.74
HSPG2-202ENST00000374676 PRAMEF27A3QJZ7 478 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 PRAMEF25A6NGN4 478 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 B8ZZF3 427 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 NPIPB9F8W1W9 429 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 FXYD1O00168 92 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 ICOSLGO75144 302 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 TRIM3O75382 744 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-202ENST00000374676 TNFRSF21O75509 655 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 STX11O75558 287 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 RASAL1O95294 804 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 UTS2O95399 124 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 ETFAP13804 333 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 ATP6V1C1P21283 382 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 TBXA2RP21731 343 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 PTGDSP41222 190 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 RFX3P48380 749 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 MEOX1P50221 254 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 DSTNP60981 165 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 FUT5Q11128 374 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 KRT72Q14CN4 511 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 HYAL4Q2M3T9 481 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 CCNJQ5T5M9 372 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 NANOGP8Q6NSW7 305 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 HACD2Q6Y1H2 254 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 LRRC74BQ6ZQY2 392 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 C16orf62Q7Z3J2 963 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-202ENST00000374676 ZAR1Q86SH2 424 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 METTL25Q8N6Q8 603 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 OIT3Q8WWZ8 545 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 PMM1Q92871 262 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 ROPN1LQ96C74 230 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 RCN3Q96D15 328 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 FRMD6Q96NE9 622 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 TRNT1Q96Q11 434 aaKnown RBP10.41□□□□□ -0.74
HSPG2-202ENST00000374676 TAAR6Q96RI8 345 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 BARD1Q99728 777 aaKnown RBP10.41□□□□□ -0.74
HSPG2-202ENST00000374676 SH3GL1Q99961 368 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 ZNF350Q9GZX5 532 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 IKZF5Q9H5V7 419 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 METTL7AQ9H8H3 244 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 NANOGQ9H9S0 305 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 IL1RL2Q9HB29 575 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 UBQLN4Q9NRR5 601 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 LUZP4Q9P127 313 aa10.41□□□□□ -0.74
HSPG2-202ENST00000374676 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.41□□□□□ -0.74
HSPG2-202ENST00000374676 HEATR5AQ86XA9 2040 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 PINLYPA6NC86 204 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 EIF4E1BA6NMX2 242 aaKnown RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 TTLL8A6PVC2 850 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 ALG1L2C9J202 215 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 G3V3Y1 287 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 ADAM10O14672 748 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 FCMRO60667 390 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 C1QL1O75973 258 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 OXSR1O95747 527 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 CRYABP02511 175 aaKnown RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 TFPTP0C1Z6 253 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 EVI2BP34910 448 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 DNASE1L1P49184 302 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 CLK3P49761 638 aaKnown RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 ATP12AP54707 1039 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 GAS1P54826 345 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 GPR85P60893 370 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 FOXO1Q12778 655 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 INPP5JQ15735 1006 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 MAPK11Q15759 364 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 SYPL1Q16563 259 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 GRAMD1BQ3KR37 738 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 PRAMEF20Q5VT98 475 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 PRAMEF8Q5VWM4 474 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 PRAMEF7Q5VXH5 474 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 BICRALQ6AI39 1079 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 FRRS1Q6ZNA5 592 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 ZNF843Q8N446 348 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 CISD2Q8N5K1 135 aaKnown RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 OR8J3Q8NGG0 315 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 OR4C3Q8NH37 302 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 TMEM41AQ96HV5 264 aa10.4□□□□□ -0.74
HSPG2-202ENST00000374676 HOPXQ9BPY8 73 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 GPATCH1Q9BRR8 931 aaKnown RBP10.4□□□□□ -0.74
HSPG2-202ENST00000374676 DOHHQ9BU89 302 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms