RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 GK2Q14410 553 aaPredicted RBP13.55□□□□□ -0.24
TRAF1-201ENST00000373887 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 LRRC25Q8N386 305 aaPredicted RBP13.55□□□□□ -0.24
TRAF1-201ENST00000373887 IQCF1Q8N6M8 205 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 HUS1BQ8NHY5 278 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 DEDD2Q8WXF8 326 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 MGLLQ99685 303 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 GDE1Q9NZC3 331 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 NFS1Q9Y697 457 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 IL4RP24394 825 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 BDH1Q02338 343 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 POU4F2Q12837 409 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF791Q3KP31 576 aaPredicted RBP13.55□□□□□ -0.24
TRAF1-201ENST00000373887 C6orf141Q5SZD1 244 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 LIPIQ6XZB0 460 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 OR1S1Q8NH92 325 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 MAP4K2Q12851 820 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 PCGF3Q3KNV8 242 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ENPP6Q6UWR7 440 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF420Q8TAQ5 688 aaPredicted RBP13.55□□□□□ -0.24
TRAF1-201ENST00000373887 RLIMQ9NVW2 624 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ARPC5O15511 151 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 AARDQ4LEZ3 155 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 SLC18B1Q6NT16 456 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 TMEM53Q6P2H8 277 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 HSD11B1LQ7Z5J1 315 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 SMIM14Q96QK8 99 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 SPO11Q9Y5K1 396 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 TRAV18A0A075B6X5 111 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 GXYLT2A0PJZ3 443 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ANHXE9PGG2 379 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 RAB3BP20337 219 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 SPHARQ15513 63 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 TANGO2Q6ICL3 276 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 RPL13AP3Q6NVV1 102 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 OR14L1PQ8NHC6 308 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 TCTEX1D2Q8WW35 142 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 SLAMF9Q96A28 289 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 LGALS12Q96DT0 336 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 MAP3K3Q99759 626 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 HERPUD2Q9BSE4 406 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ABRACLQ9P1F3 81 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 SIT1Q9Y3P8 196 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SGK494L7N484 410 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 PGCP20142 388 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SQSTM1Q13501 440 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 C6orf136Q5SQH8 315 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 KCTD20Q7Z5Y7 419 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 FAM83FQ8NEG4 500 aaPredicted RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 OR5AK2Q8NH90 309 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 TSPEARQ8WU66 669 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SLCO2A1Q92959 643 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 RPH3ALQ9UNE2 315 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 PRAMEF26H0Y7S4 382 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SULT1B1O43704 296 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 ARAFP10398 606 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 ERVK-16P61578 105 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 IRF4Q15306 451 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 VASH1Q7L8A9 365 aaPredicted RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 GPR155Q7Z3F1 870 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 CREB3L4Q8TEY5 395 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 FTCDNL1E5RQL4 147 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 KLF16Q9BXK1 252 aaPredicted RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SMIM3Q9BZL3 60 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 GPRC5BQ9NZH0 403 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 VSTM2BA6NLU5 285 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 H0YAE9 185 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 ATG12O94817 140 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 PPP1R3DO95685 299 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 DCNP07585 359 aaKnown RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 RETP07949 1114 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 FBXO45P0C2W1 286 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 PTGER1P34995 402 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 ATP4BP51164 291 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 ARHGAP11AQ6P4F7 1023 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 EGFL6Q8IUX8 553 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 C16orf78Q8WTQ4 265 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SLC6A17Q9H1V8 727 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 CCL26Q9Y258 94 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 TMEM265A0A087WTH1 108 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 LIPCP11150 499 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 BMP1P13497 986 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 TNFRSF1BP20333 461 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 KLHDC8AQ8IYD2 350 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 OR9K2Q8NGE7 335 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 OR51L1Q8NGJ5 315 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 ZBED3Q96IU2 234 aaPredicted RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 NXF5Q9H1B4 397 aaKnown RBP13.54□□□□□ -0.24
TRAF1-201ENST00000373887 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
TRAF1-201ENST00000373887 SLC22A31A6NKX4 558 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 SLC1A7O00341 560 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF888P0CJ79 500 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 RRAS2P62070 204 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 SHHQ15465 462 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ATG9BQ674R7 924 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms