RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 IGLON5A6NGN9 336 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 EDIL3O43854 480 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 ONECUT3O60422 494 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 UBBP0CG47 229 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 UBCP0CG48 685 aaKnown RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SDC1P18827 310 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 RPS27AP62979 156 aaKnown RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 UBA52P62987 128 aaKnown RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 HTD2P86397 168 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 HES5Q5TA89 166 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 TEX26Q8N6G2 289 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 GATSQ8NAP1 163 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 WDR20Q8TBZ3 569 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 TMEM234Q8WY98 164 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 FRZBQ92765 325 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SLC25A44Q96H78 314 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 C20orf27Q9GZN8 174 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 POT1Q9NUX5 634 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 TMPRSS11EQ9UL52 423 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 ARPC5O15511 151 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 RAB11BQ15907 218 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 DEFB134Q4QY38 66 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CLLU1OSQ5K130 101 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 TTC9BQ8N6N2 239 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 GLYATL2Q8WU03 294 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CDC6Q99741 560 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 MROQ9BYG7 248 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CLMPQ9H6B4 373 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 MTHFD2LQ9H903 347 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 KCNS2Q9ULS6 477 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 A0A0A6YYH2 397 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 A0A1W2PQL4 384 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CPED1A4D0V7 1026 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 A6NJ64 397 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 H2BFMP0C1H6 154 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 ENDOUP21128 410 aaKnown RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 BDKRB2P30411 391 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CCDC71LQ8N9Z2 235 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 GLTPQ9NZD2 209 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 NOX1Q9Y5S8 564 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 NPIPB15A6NHN6 443 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SHOXO15266 292 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 KLF8O95600 359 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 AKR1C4P17516 323 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 TAS2R20P59543 309 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 GBX1Q14549 363 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 MFSD13AQ14CX5 517 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 UBE2UQ5VVX9 321 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 DESI1Q6ICB0 168 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 PLBD1Q6P4A8 553 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 FAM217AQ8IXS0 508 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 OR6N1Q8NGY5 312 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 TGM7Q96PF1 710 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 ARNT2Q9HBZ2 717 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SLC7A11Q9UPY5 501 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CDK4P11802 303 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 PRKCAP17252 672 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 WNT4P56705 351 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SFRP4Q6FHJ7 346 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 B3GNT8Q7Z7M8 397 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 METTL27Q8N6F8 245 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SPIN2AQ99865 258 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 SPIN2BQ9BPZ2 258 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 PELOQ9BRX2 385 aaKnown RBP13.45□□□□□ -0.26
LMX1B-202ENST00000373474 ACPTQ9BZG2 426 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 FANCFQ9NPI8 374 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 ASB6Q9NWX5 421 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 DKKL1Q9UK85 242 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 CACNG2Q9Y698 323 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 NR4A2P43354 598 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 FAM189BP81408 668 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 MRPS10P82664 201 aaKnown RBP13.44□□□□□ -0.26
LMX1B-202ENST00000373474 GRIN2CQ14957 1233 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 CTSL3PQ5NE16 218 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 PLAG1Q6DJT9 500 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF534Q76KX8 674 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 TMEM173Q86WV6 379 aaPredicted RBP13.44□□□□□ -0.26
LMX1B-202ENST00000373474 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 PNPLA1Q8N8W4 532 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 ANKK1Q8NFD2 765 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 OR13C3Q8NGS6 347 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 RRNAD1Q96FB5 475 aaKnown RBP13.44□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF300Q96RE9 604 aaPredicted RBP13.44□□□□□ -0.26
LMX1B-202ENST00000373474 CSNK1G1Q9HCP0 422 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 GPR52Q9Y2T5 361 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 SLC22A5O76082 557 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 HEXBP07686 556 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 AAK1Q2M2I8 961 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 MORN1Q5T089 497 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 DPY19L2P1Q6NXN4 242 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF551Q7Z340 670 aaPredicted RBP13.44□□□□□ -0.26
LMX1B-202ENST00000373474 KCTD20Q7Z5Y7 419 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF619Q8N2I2 560 aa13.44□□□□□ -0.26
LMX1B-202ENST00000373474 SUMF2Q8NBJ7 301 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms