RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 C17orf82Q86X59 251 aaPredicted RBP16.64■□□□□ 0.25
CTSA-204ENST00000372484 GALNT12Q8IXK2 581 aa16.64■□□□□ 0.25
CTSA-204ENST00000372484 TEX47Q8TBZ9 253 aa16.64■□□□□ 0.25
CTSA-204ENST00000372484 RBM18Q96H35 190 aaKnown RBP16.64■□□□□ 0.25
CTSA-204ENST00000372484 SPACA7Q96KW9 195 aa16.64■□□□□ 0.25
CTSA-204ENST00000372484 POLDIP3Q9BY77 421 aaKnown RBP16.64■□□□□ 0.25
CTSA-204ENST00000372484 PLA2G12AQ9BZM1 189 aa16.64■□□□□ 0.25
CTSA-204ENST00000372484 PLCL2Q9UPR0 1127 aa16.64■□□□□ 0.25
CTSA-204ENST00000372484 RPL36Q9Y3U8 105 aaKnown RBP16.64■□□□□ 0.25
CTSA-204ENST00000372484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 NPIPA5A0A0B4J1W7 369 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 IGHV5-51A0A0C4DH38 117 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 GXYLT2A0PJZ3 443 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 HYKKA2RU49 373 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 EFCAB9A8MZ26 197 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 NPIPA7E9PJI5 369 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 COQ9O75208 318 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 THY1P04216 161 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 ADRA2AP08913 450 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 HSMCR30P0CW71 290 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 NPIPA8P0DM63 369 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 OMPP47874 163 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 MAT1AQ00266 395 aaKnown RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 MAP4K2Q12851 820 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 FAM53BQ14153 422 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 OCLNQ16625 522 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 ZNF829Q3KNS6 432 aaPredicted RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 MRPL2Q5T653 305 aaKnown RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 MFSD4BQ5TF39 518 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 NIPAL1Q6NVV3 410 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 BCDIN3DQ7Z5W3 292 aaKnown RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 CROCCP3Q8IVE0 287 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 CAMKK1Q8N5S9 505 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 C1orf216Q8TAB5 229 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 UCKL1Q9NWZ5 548 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 KCNE5Q9UJ90 142 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 SLC7A7Q9UM01 511 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 TLCD2A6NGC4 264 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 AIREO43918 545 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 NSA2O95478 260 aaKnown RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 CLK1P49759 484 aaKnown RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 BMXP51813 675 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 ZNF136P52737 540 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 MED22Q15528 200 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 C14orf28Q4W4Y0 310 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 ARMCX4Q5H9R4 360 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 SLC27A4Q6P1M0 643 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 ZNF367Q7RTV3 350 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 FAM26EQ8N5C1 309 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 WDR36Q8NI36 951 aaKnown RBP16.63■□□□□ 0.25
CTSA-204ENST00000372484 TMEM255BQ8WV15 326 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 RIT1Q92963 219 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 DSN1Q9H410 356 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 PDE7BQ9NP56 450 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 KLHL3Q9UH77 587 aa16.63■□□□□ 0.25
CTSA-204ENST00000372484 RHPN2P1A8MT19 583 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 SOX1O00570 391 aaPredicted RBP16.62■□□□□ 0.25
CTSA-204ENST00000372484 CLDN4O14493 209 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 BRINP1O60477 761 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 CTNSO60931 367 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 DBTP11182 482 aaKnown RBP16.62■□□□□ 0.25
CTSA-204ENST00000372484 RFX3P48380 749 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 RNF144AP50876 292 aaPredicted RBP16.62■□□□□ 0.25
CTSA-204ENST00000372484 ZNF91Q05481 1191 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 ERV3-1Q14264 604 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 SNAPC1Q16533 368 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 NKAIN2Q5VXU1 208 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 MEDAGQ5VYS4 303 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 RASSF6Q6ZTQ3 369 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 SLC46A3Q7Z3Q1 461 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 NRMQ8IXM6 262 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 ZNF595Q8IYB9 648 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 SDR16C5Q8N3Y7 309 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 TOR1AIP2Q8NFQ8 470 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 BORCS5Q969J3 196 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 MMABQ96EY8 250 aaPredicted RBP16.62■□□□□ 0.25
CTSA-204ENST00000372484 TSSK6Q9BXA6 273 aa16.62■□□□□ 0.25
CTSA-204ENST00000372484 TP53BP1Q12888 1972 aaPredicted RBP16.62■□□□□ 0.25
CTSA-204ENST00000372484 CDHR4A6H8M9 788 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 TGFBR3LH3BV60 316 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 NKX2-2O95096 273 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 GKN3PP0CG01 181 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 PRG2P13727 222 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 S1PR1P21453 382 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 BCKDHBP21953 392 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 GADD45AP24522 165 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 GABRA4P48169 554 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 DGUOKQ16854 277 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 OGFOD3Q6PK18 319 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 MBOAT2Q6ZWT7 520 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 C11orf74Q86VG3 221 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 METTL27Q8N6F8 245 aaPredicted RBP16.61■□□□□ 0.25
CTSA-204ENST00000372484 OR6C4Q8NGE1 309 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 DYNC2LI1Q8TCX1 351 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ZHX1-C8orf76Q96EF9 292 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 LRR1Q96L50 414 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ZNF285Q96NJ3 590 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 OR5M11Q96RB7 305 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ALOXE3Q9BYJ1 711 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ARMC7Q9H6L4 198 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms