RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 OR2T11Q8NH01 316 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 OTUB1Q96FW1 271 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM169Q96HH4 297 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CDKN2AIPNLQ96HQ2 116 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 HRASLS5Q96KN8 279 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 BARD1Q99728 777 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 VN1R3Q9BXE9 311 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CDCA4Q9BXL8 241 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 RHBGQ9H310 441 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 IMP3Q9NV31 184 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 PPP4R1LQ9P1A2 415 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 METTL1Q9UBP6 276 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 AFF4Q9UHB7 1163 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF490Q9ULM2 529 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 TET1Q8NFU7 2136 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 MEX3AA1L020 520 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 FPGTO14772 594 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SIGLEC5O15389 551 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 INSIG1O15503 277 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 LCMT2O60294 686 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 FKTNO75072 461 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 STC2O76061 302 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 HPP00738 406 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SAGP10523 405 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CD1DP15813 335 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 MMP12P39900 470 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SGSHP51688 502 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF140P52738 457 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 STC1P52823 247 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 HNRNPKP61978 463 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 PPP3R1P63098 170 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SIGLEC14Q08ET2 396 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 HABP2Q14520 560 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 GUCA2BQ16661 112 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF678Q5SXM1 525 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CYB5R2Q6BCY4 276 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SEZ6L2Q6UXD5 910 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CA5BP1Q8WTZ4 195 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 KCNJ9Q92806 393 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 POP5Q969H6 163 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 L3HYPDHQ96EM0 354 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF583Q96ND8 569 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 DMRTA2Q96SC8 542 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 NCOR1P1Q9H4R4 102 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 POPDC3Q9HBV1 291 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 EXOSC4Q9NPD3 245 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 NLE1Q9NVX2 485 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 GREB1Q4ZG55 1949 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 MIA3Q5JRA6 1907 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 HYKKA2RU49 373 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR6C68A6NDL8 312 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 J3KRW8 73 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 FFAR3O14843 346 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 PER2O15055 1255 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 ADAMDEC1O15204 470 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GPR42O15529 346 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SCELO95171 688 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RAC2P15153 192 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CORO1AP31146 461 aaKnown RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 HOXC12P31275 282 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CRYBB2P43320 205 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RPP30P78346 268 aaKnown RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 NPRL3Q12980 569 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF177Q13360 481 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GPR176Q14439 515 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 THEM4Q5T1C6 240 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM17Q86X19 198 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 PUSL1Q8N0Z8 303 aaKnown RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR2C3Q8N628 320 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF548Q8NEK5 533 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUSP15Q9H1R2 295 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CWH43Q9H720 699 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RNF122Q9H9V4 155 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 HHATLQ9HCP6 504 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM45AQ9NWC5 275 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GPR83Q9NYM4 423 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 VSX1Q9NZR4 365 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GIMAP2Q9UG22 337 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CA14Q9ULX7 337 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CLCA2Q9UQC9 943 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DNAJC15Q9Y5T4 150 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 A0A1B0GW55 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR6C74A6NCV1 312 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 MYO1GB0I1T2 1018 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 WASH3PC4AMC7 463 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 TEX46H3BTG2 121 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CXCL10P02778 98 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SCG5P05408 212 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 HEXAP06865 529 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RHOCP08134 193 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4L2P0CJ85 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4L3P0CJ86 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4L4P0CJ87 422 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4L5P0CJ88 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4L6P0CJ89 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4L7P0CJ90 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 PRSS56P0CW18 603 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 G6PDP11413 515 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CBR1P16152 277 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms